关键词: APC RCA affinity binding mechanisms ratio fluorescent probe

Mesh : Fluorescent Dyes / chemistry Cadmium Aptamers, Nucleotide / chemistry Peptides Biosensing Techniques / methods Nucleic Acid Amplification Techniques / methods Limit of Detection

来  源:   DOI:10.1021/acs.jafc.3c08636

Abstract:
The existing aptamers for cadmium (Cd2+), the common toxic heavy metal contaminant in food, cannot meet the requirements for detecting Cd2+ in rapid detection methods. In previous work, we found that coupling aptamer-peptide conjugates (APCs) with peptides and aptamers can provide a less disruptive method with a significantly improved affinity. Moreover, we found that the spatial conformation of aptamers and peptides is crucial for obtaining proper affinity in APC. Therefore, we describe a simple design strategy to obtain a series of APCs with different affinities by designing peptide orientations (N-terminal, C-terminal). The best affinity was found for APC(C1-N) with a binding constant (Ka) of 2.23 × 106 M-1, indicating that the APC(C1-N) affinity was significantly increased by 829.17% over aptamer. Finally, a rolling-circle amplification (RCA)-coupled ratio fluorescence-based biosensor for Cd2+ detection was established with a detection limit of 0.0036 nM, which has great potential for practical aquatic product detection.
摘要:
现有的镉(Cd2+)适体,食品中常见的有毒重金属污染物,快速检测方法不能满足Cd2+的检测要求。在以前的工作中,我们发现,将适体-肽缀合物(APC)与肽和适体偶联可以提供一种破坏性较小的方法,并且亲和力显著提高.此外,我们发现适体和肽的空间构象对于在APC中获得适当的亲和力至关重要。因此,我们描述了一种简单的设计策略,通过设计肽取向(N端,C端子)。对于结合常数(Ka)为2.23×106M-1的APC(C1-N),发现了最佳的亲和力,表明APC(C1-N)亲和力比适体显着增加了829.17%。最后,建立了基于滚环扩增(RCA)耦合比荧光的Cd2+检测生物传感器,检出限为0.0036nM,这对于实际水产品检测具有很大的潜力。
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