Mesh : Bacterial Outer Membrane Proteins / genetics Base Sequence Consensus Sequence DNA, Bacterial / genetics Endopeptidases / genetics Genes, Bacterial Methylmalonyl-CoA Mutase / genetics Molecular Sequence Data Plasmids / genetics Porphyromonas gingivalis / genetics Promoter Regions, Genetic Sequence Alignment Sequence Analysis, DNA Transcription, Genetic

来  源:   DOI:10.1111/j.1574-6968.2000.tb09094.x   PDF(Sci-hub)

Abstract:
We have determined the transcription start points (tsp) for recently identified Porphyromonas gingivalis W50 genes, kgp, rgpA, rgpB (formerly designated prtK, prtR, and prtRII respectively), fetB and the mcmAB operon. Alignment of the DNA upstream of these tsp and those from the literature has enabled us to identify consensus sequences that may represent a P. gingivalis promoter. There is a potential -10 hexamer sequence, 5\'-TATATT-3\' centred on average at -10/11 nt which is repeated at -19/20 nt and an upstream consensus, 5\'-CAGAT(A/G)-3\' which is centred at -39/40 nt.
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