recombinant protein

重组蛋白
  • 文章类型: Journal Article
    家蚕-杆状病毒表达载体系统(家蚕-BEVS),利用家蚕核型多角体病毒(BmNPV)和家蚕幼虫或蛹,已被用作生产各种重组蛋白的具有成本效益的表达系统。最近,杆状病毒中的几种基因敲除已被证明可以提高重组蛋白的生产率。然而,杆状病毒基因组的基因编辑(约130kb)仍然具有挑战性和耗时。在这项研究中,我们试图通过使用两步金门组装(GGA)从含有BmNPV基因组DNA片段的质粒中合成和基因编辑BmNPVbacmid,进一步提高家蚕BEVS的生产力。BmNPV基因组,分成19个片段,通过PCR扩增并克隆到质粒中。从这些初始质粒中,用IIS型限制酶BsaI通过GGA构建了四个含有BmNPV基因组DNA的中间质粒。随后,通过GGA与另一种IIS限制性酶PaqCI从四个中间质粒成功合成了全长杆粒,效率高达97.2%。此外,这种方法能够快速而直接地产生缺乏六个基因的BmNPVbacmid,抑制了蚕蛹中表达的重组蛋白的降解。这些结果表明,仅使用简单的克隆技术和酶促反应就可以快速有效地编辑BmNPVbacmid,标志着蚕BEVS的改进取得了重大进展。
    The silkworm-baculovirus expression vector system (silkworm-BEVS), using Bombyx mori nucleopolyhedrovirus (BmNPV) and silkworm larvae or pupae, has been used as a cost-effective expression system for the production of various recombinant proteins. Recently, several gene knockouts in baculoviruses have been shown to improve the productivity of recombinant proteins. However, the gene editing of the baculovirus genome (approximately 130kb) remains challenging and time-consuming. In this study, we sought to further enhance the productivity of the silkworm-BEVS by synthesizing and gene editing the BmNPV bacmid from plasmids containing fragments of BmNPV genomic DNA using a two-step Golden Gate Assembly (GGA). The BmNPV genome, divided into 19 fragments, was amplified by PCR and cloned into the plasmids. From these initial plasmids, four intermediate plasmids containing the BmNPV genomic DNA were constructed by GGA with the type IIS restriction enzyme BsaI. Subsequently, the full-length bacmid was successfully synthesized from the four intermediate plasmids by GGA with another type IIS restriction enzyme PaqCI with a high efficiency of 97.2%. Furthermore, this methodology enabled the rapid and straightforward generation of the BmNPV bacmid lacking six genes, resulting in the suppression of degradation of recombinant proteins expressed in silkworm pupae. These results indicate that the BmNPV bacmid can be quickly and efficiently edited using only simple cloning techniques and enzymatic reactions, marking a significant advancement in the improvement of the silkworm-BEVS.
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  • 文章类型: Journal Article
    目前,生物制药受到了社会的广泛关注,其中重组蛋白具有良好的增长趋势和较大的市场份额。中国仓鼠卵巢(CHO)细胞是生产糖基化重组蛋白药物的优选哺乳动物系统。需要开发高效且稳定的细胞筛选方法以获得更多有用的重组蛋白。有限稀释法,细胞分选,半固体培养基筛选是目前常用的细胞克隆方法。这些方法耗时耗力,它们具有克隆存活率低的缺点。这里,开发了一种基于半固体培养基的方法,以在3周内筛选出高产且稳定的细胞系,以提高筛选效率。将半固体培养基与含有红色荧光蛋白(RFP)的表达载体组合用于早期细胞系发育。根据RFP的荧光强度,可以指示上游靶基因的表达,荧光强度与上游靶基因的表达成正比。总之,半固体培养基结合双顺反子表达载体为筛选稳定和高表达的细胞系提供了一种有效的方法。
    At present, biopharmaceuticals have received extensive attention from the society, among which recombinant proteins have a good growth trend and a large market share. Chinese hamster ovary (CHO) cells are the preferred mammalian system to produce glycosylated recombinant protein drugs. A highly efficient and stable cell screening method needs to be developed to obtain more and useful recombinant proteins. Limited dilution method, cell sorting, and semi-solid medium screening are currently the commonly used cell cloning methods. These methods are time-consuming and labor-intensive, and they have the disadvantage of low clone survival rate. Here, a method based on semi-solid medium was developed to screen out high-yielding and stable cell line within 3 weeks to improve the screening efficiency. The semi-solid medium was combined with an expression vector containing red fluorescent protein (RFP) for early cell line development. In accordance with the fluorescence intensity of RFP, the expression of upstream target gene could be indicated, and the fluorescence intensity was in direct proportion to the expression of upstream target gene. In conclusion, semi-solid medium combined with bicistronic expression vector provides an efficient method for screening stable and highly expressed cell lines.
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  • 文章类型: Journal Article
    目前针对神经毒剂中毒的医疗对策(MCMs)疗效有限,并可能造成严重的不良影响,促使人们需要新的广谱疗法。人血浆衍生的丁酰胆碱酯酶(huBChE)是一种有前途的新型生物清除剂MCM,在动物研究中显示出潜力,然而,在经济上禁止大规模生产。这项研究通过首次直接比较新型rBChE设计策略,解决了在哺乳动物细胞中经济生产生物活性和长效重组huBChE(rBChE)的当前挑战。这些包括富含脯氨酸的附着结构域(PRAD)的共表达和BChE与蛋白质配偶体的融合。此外,本研究中开发的纯化前筛选方法能够平行比较表达效率,10种新型rBChE分子设计的活性和与神经毒剂的广谱结合。所有设计的rBChE都展示了充当G的广谱MCM的功能,V和A系列神经毒剂。使用ExpiCHO™Max协议的表达为所有构建体提供了最高的表达水平和活性,大多数rBChE在Expi293™中表达较差。Fc或hSA融合的rBChE显着优于设计用于模拟huBChE的构建体,包括PRAD-BChE,并证明了一种显着提高酶活性和表达的有效策略。选择蛋白质伴侣,方向性和接头的添加也影响融合rBChE活性和表达。总的来说,hSA融合的rBChE提供了最大的表达产量和活性,BChE-hSA是性能最好的构建体。纯化和表征的BChE-hSA表现出与被GD抑制的huBChE相似的功能,VX和A-234,支持预筛选研究的结果,并验证其以经济有效的方式评估和简化rBChE构建体的选择过程的能力。总的来说,这些结果有助于在早期发展中降低风险,提供了一种比较rBChE设计的系统方法,并为未来的发展提供了重点。
    Current medical countermeasures (MCMs) for nerve agent poisoning have limited efficacy, and can cause serious adverse effects, prompting the requirement for new broad-spectrum therapeutics. Human plasma-derived butyrylcholinseterase (huBChE) is a promising novel bioscavenger MCM which has shown potential in animal studies, however, is economically prohibitive to manufacture at scale. This study addresses current challenges for the economical production of a bioactive and long-acting recombinant huBChE (rBChE) in mammalian cells by being the first to directly compare novel rBChE design strategies. These include co-expression of a proline rich attachment domain (PRAD) and fusion of BChE with a protein partner. Additionally, a pre-purification screening method developed in this study enables parallel comparison of the expression efficiency, activity and broad-spectrum binding to nerve agents for ten novel rBChE molecular designs. All designed rBChE demonstrated functionality to act as broad-spectrum MCMs to G, V and A series nerve agents. Expression using the ExpiCHO™ Max protocol provided greatest expression levels and activity for all constructs, with most rBChE expressing poorly in Expi293™. Fc- or hSA-fused rBChE significantly outperformed constructs designed to mimic huBChE, including PRAD-BChE, and proved an effective strategy to significantly improve enzyme activity and expression. Choice of protein partner, directionality and the addition of a linker also impacted fusion rBChE activity and expression. Overall, hSA fused rBChE provided greatest expression yield and activity, with BChE-hSA the best performing construct. The purified and characterized BChE-hSA demonstrated similar functionality to huBChE to be inhibited by GD, VX and A-234, supporting the findings of the pre-screening study and validating its capacity to assess and streamline the selection process for rBChE constructs in a cost-effective manner. Collectively, these outcomes contribute to risk mitigation in early-stage development, providing a systematic method to compare rBChE designs and a focus for future development.
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  • 文章类型: Journal Article
    天然生物材料,特别是纤维状蛋白质,广泛用于皮肤组织工程。然而,它们的应用受到批次间差异的阻碍,有限的化学或物理通用性,和环境问题。基因编辑和发酵技术的最新进展催化了重组纤维蛋白生物材料的出现,它们在皮肤组织工程中越来越受欢迎。重组合成的模块化和高度可定制性使得能够精确控制生物材料设计,促进多功能基序的整合。此外,重组合成允许从动物来源过渡到微生物来源,从而降低内毒素含量并使重组纤维蛋白生物材料更适合于可扩展的生产和临床使用。在这次审查中,我们提供了流行的重组纤维蛋白生物材料(胶原蛋白,弹性蛋白,丝蛋白及其嵌合衍生物)用于皮肤组织工程(STE),并将其与动物来源的对应物进行比较。此外,我们讨论它们在STE中的应用,以及相关的挑战和未来前景。
    Natural biomaterials, particularly fibrous proteins, are extensively utilized in skin tissue engineering. However, their application is impeded by batch-to-batch variance, limited chemical or physical versatility, and environmental concerns. Recent advancements in gene editing and fermentation technology have catalyzed the emergence of recombinant fibrous protein biomaterials, which are gaining traction in skin tissue engineering. The modular and highly customizable nature of recombinant synthesis enables precise control over biomaterial design, facilitating the incorporation of multiple functional motifs. Additionally, recombinant synthesis allows for a transition from animal-derived sources to microbial sources, thereby reducing endotoxin content and rendering recombinant fibrous protein biomaterials more amenable to scalable production and clinical use. In this review, we provide an overview of prevalent recombinant fibrous protein biomaterials (collagens, elastin, silk proteins and their chimeric derivatives) used in skin tissue engineering (STE) and compare them with their animal-derived counterparts. Furthermore, we discuss their applications in STE, along with the associated challenges and future prospects.
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  • 文章类型: Journal Article
    孕妇在受孕前或怀孕期间接种疫苗可增强新生儿对许多病原体的免疫保护。进行可行性实验以确定猴子是否可用于模拟针对SARS-CoV-2的母体抗体的胎盘转移。用包含受体结合结构域人IgG1-Fc融合蛋白(RBD-Fc)的佐剂重组蛋白抗原对六只成年恒河猴进行免疫,该蛋白抗原包含来自祖先武汉或Gamma变体的蛋白序列。雌性猴子产生了强大而持续的抗SARS-CoV-2抗体反应。从分娩后的婴儿收集的血液样本证实了高水平的尖峰特异性IgG的产前转移,与足月孕妇IgG滴度呈正相关。此外,ACE2中和的体外试验表明,婴儿IgG表现出抗原特异性,反映了先前用武汉或γ变异抗原进行母体免疫。当测定中的变体与疫苗RBD序列更接近时,所有血清均显示出更强的ACE2-RBD结合抑制,而不是与更远相关的变体(即,Delta和Omicron)。猴子是一种有价值的动物模型,用于评估可以促进母婴健康的新疫苗。Further,研究结果强调了佐剂化重组RBD-Fc疫苗引发的免疫保护的持久性和安全性.
    Maternal vaccinations administered prior to conception or during pregnancy enhance the immune protection of newborn infants against many pathogens. A feasibility experiment was conducted to determine if monkeys can be used to model the placental transfer of maternal antibody against SARS-CoV-2. Six adult rhesus monkeys were immunized with adjuvanted recombinant-protein antigens comprised of receptor-binding domain human IgG1-Fc fusion proteins (RBD-Fc) containing protein sequences from the ancestral-Wuhan or Gamma variants. The female monkeys mounted robust and sustained anti-SARS-CoV-2 antibody responses. Blood samples collected from their infants after delivery verified prenatal transfer of high levels of spike-specific IgG, which were positively correlated with maternal IgG titers at term. In addition, an in vitro test of ACE2 neutralization indicated that the infants\' IgG demonstrated antigen specificity, reflecting prior maternal immunization with either Wuhan or Gamma-variant antigens. All sera showed stronger ACE2-RBD binding inhibition when variants in the assay more closely resembled the vaccine RBD sequence than with more distantly related variants (i.e., Delta and Omicron). Monkeys are a valuable animal model for evaluating new vaccines that can promote maternal and infant health. Further, the findings highlight the enduring nature and safety of the immune protection elicited by an adjuvanted recombinant RBD-Fc vaccine.
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  • 文章类型: Journal Article
    L-古洛内酯氧化酶(GULO)催化L-抗坏血酸(维生素C)生物合成的最后一步。这种酶活性在灵长类动物中丧失。全长大鼠GULO先前已在植物中产生并证明是有活性的。在这项研究中,我们比较了大肠杆菌细胞中产生的两种GULO变体的活性,全长大鼠GULO(fGULO)及其C末端催化结构域(cGULO)。优化重组蛋白的表达和纯化,它们的生物活性通过两种方法得到证实,蛋白质提取物中的GULO活性测定和GULO活性的凝胶内染色。重组GULO的两种变体在两种测定中均具有生物活性。然而,cGULO比fGULO更有希望用于抗坏血酸生产,因为它由细菌更有效地生产。此外,在pH7和6.5以及40和30°C的温度下观察到fGULO和cGULO重组蛋白的最佳活性,分别。动力学研究表明,在低底物浓度下,fGULO和cGULO的Km值分别为53.5±5和42±6.3µM,分别。
    The L-gulonolactone oxidase enzyme (GULO) catalyzes the last step of L-ascorbic acid (vitamin C) biosynthesis. This enzymatic activity is lost in primates. The full-length rat GULO has been previously produced in plants and demonstrated to be active. In this study, we compared the activity of two variants of GULO produced in Escheriachia coli cells, full-length rat GULO (fGULO) and its C-terminal catalytic domain (cGULO). The expression and purification of the recombinant proteins were optimized, and their biological activity was confirmed by two methods, the GULO activity assay in the protein extracts and the \'in-gel\' staining for GULO activity. Both variants of recombinant GULO were biologically active in both assays. However, cGULO is more promising than fGULO for ascorbic acid production because it is more efficiently produced by bacteria. Furthermore, the optimal activities of the fGULO and cGULO recombinant proteins were observed at pH 7 and 6.5, and at temperatures of 40 and 30 °C, respectively. Kinetic studies revealed that at low substrate concentrations, Km values for fGULO and cGULO were 53.5 ± 5 and 42 ± 6.3 µM, respectively.
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  • 文章类型: Journal Article
    目的:研究重组α-丝芬(LUF)的抗癌特性。然而,将LUF封装在Niosomes内对SKBR3乳腺癌细胞系的细胞毒性作用尚待研究.我们的研究旨在研究这种包封策略是否可以改善细胞毒性作用。
    方法:Alpha-liffin表达,纯化,重新折叠。然后,这种蛋白质被用来制作最佳配方,以实验设计为指导。在这项工作中,我们探索了各种物理化学性质,包括颗粒大小,多分散指数,zeta电位,形态学,截留效率,药物释放和动力学,储存稳定性,和FTIR光谱。此外,我们评估了优化的脂质体制剂对SKBR3乳腺癌细胞系的细胞摄取和细胞毒性作用.
    结果:优化的脂质体表现出315±6.4nm(DLS)的平均直径。成功地将LUF封装成规则形状,实现了球形囊体,封装效率为73.45±2.4%。值得注意的是,小脂质体LUF(NLUF)对SKBR3细胞表现出显著增加的细胞毒性。
    结论:这些研究结果表明,负载LUF的niosome有望成为乳腺癌的潜在治疗策略。
    OBJECTIVE: The anticancer properties of recombinant α-luffin (LUF) are wellestablished. However, the cytotoxic effects of encapsulating LUF within niosomes on the SKBR3 breast cancer cell line have yet to be explored. Our study aimed to investigate whether this encapsulation strategy could improve cytotoxic effects.
    METHODS: Alpha-luffin was expressed, purified, and refolded. Then, this protein was utilized to craft an optimal formulation, guided by experimental design. In this work, we have explored various physicochemical properties, including particle size, polydispersity index, zeta potential, morphology, entrapment efficiency, drug release and kinetics, storage stability, and FTIR spectroscopy. Additionally, we have assessed the cellular uptake and cytotoxic effect of the optimized niosome formulation on the SKBR3 breast cancer cell line.
    RESULTS: The optimized niosome exhibited a mean diameter of 315±6.4 nm (DLS). Successful encapsulation of LUF into regularly shaped, spherical niosomes was achieved, with an encapsulation efficiency of 73.45±2.4%. Notably, Niosomal LUF (NLUF) exhibited significantly increased cytotoxicity against SKBR3 cells.
    CONCLUSIONS: These findings suggest that niosomes loaded with LUF hold promise as a potential treatment strategy for breast cancer.
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  • 文章类型: Journal Article
    可控调节元件,比如诱导型,可滴定启动子,在合成生物学工具箱中非常需要。一组先前开发的赤藓糖醇诱导型启动子以及工程化的解脂耶氏酵母宿主菌株被证明是非常有效的表达平台。在这项研究中,我们通过使用相容的转录因子来推动先前遇到的合成启动子的可滴定性限制(通过上游基序的数量),Euf1,作为启动子滴定剂。剪接的EUF1的过表达在促进相容启动子的表达方面非常有效,然而,然后失去了启动子的赤藓糖醇诱导特性。EUF1的剪接模式的分析表明,内含子的去除在赤藓糖醇的存在下被促进,但不依赖于它。对拼接和未拼接的Euf1的3D结构进行了建模,计算并比较了配体结合强度。此外,研究了不同化学刺激剂下EUF1依赖性表达谱。碳源的消耗被确定为上调Euf1依赖性启动子表达的重要因素(2至10倍)。考虑到这些发现和转录组学数据,提出了Euf1调控启动子作用的新机制,涉及“分解代谢物抑制”转录因子-Adr1,两者都作用于相同的ERY诱导型启动子。
    Controllable regulatory elements, like inducible, titratable promoters, are highly desired in synthetic biology toolboxes. A set of previously developed erythritol-inducible promoters along with an engineered Yarrowia lipolytica host strain were shown to be a very potent expression platform. In this study, we push the previously encountered limits of the synthetic promoters\' titratability (by the number of upstream motifs) by using a compatible transcription factor, Euf1, as the promoter titrator. Overexpression of spliced EUF1 turned out to be very efficient in promoting expression from the compatible promoter, however, the erythritol-inducible character of the promoter was then lost. Analysis of the EUF1\'s splicing pattern suggests that the intron removal is promoted in the presence of erythritol, but is not dependent on it. The 3D structures of spliced vs unspliced Euf1 were modeled, and ligand binding strength was calculated and compared. Furthermore, the EUF1-dependent expression profile under different chemical stimulants was investigated. Depletion of carbon source was identified as the significant factor upregulating the expression from the Euf1-dependent promoter (2- to 10-fold). Considering these findings and transcriptomics data, a new mechanism of the Euf1-regulated promoter action is proposed, involving a \"catabolite repression\" transcription factor-Adr1, both acting on the same ERY-inducible promoter.
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  • 文章类型: Journal Article
    背景:田间害虫对杀虫剂和转基因作物的广泛抗性是可持续农业的重大挑战,并呼吁开发新的替代策略来控制害虫。发现新型杀虫分子的一个潜在资源是天然毒素,特别是那些来自昆虫捕食者的毒液。
    结果:在这项研究中,我们从掠食性臭虫的毒腺(VGs)中鉴定出三种杀虫蛋白质毒素,Arma监护人(半翅目:无翅目)。A.看管VG的转录组学分析揭示了151种潜在分泌的富含VG的毒液蛋白。通过在大肠杆菌中的过表达产生了三种富含VG的毒液蛋白(命名为AcVP1〜3)。将重组蛋白注射到烟草地虫(Spodopteralitura)幼虫中,结果表明这三种重组蛋白均引起麻痹,液化和死亡。将重组蛋白注入稻褐飞虱(Nilaparvatalugens)若虫中显示出更高的杀虫活性,其中胰蛋白酶(AcVP2)在1.27pmolmg-1体重下注射后导致100%死亡率。
    结论:本研究揭示了从捕食性昆虫中发现杀虫毒素的天然工具包。©2024化学工业学会。
    BACKGROUND: Widespread resistance of insect pests to insecticides and transgenic crops in the field is a significant challenge for sustainable agriculture, and calls for the development of novel alternative strategies to control insect pests. One potential resource for the discovery of novel insecticidal molecules is natural toxins, particularly those derived from the venoms of insect predators.
    RESULTS: In this study, we identified three insecticidal proteinaceous toxins from the venom glands (VGs) of the predatory stink bug, Arma custos (Hemiptera: Asopinae). Transcriptomic analysis of A. custos VGs revealed 151 potentially secreted VG-rich venom proteins. Three VG-rich venom proteins (designated AcVP1 ~ 3) were produced by overexpression in Escherichia coli. Injection of the recombinant proteins into tobacco cutworm (Spodoptera litura) larvae showed that all of the three recombinant proteins caused paralysis, liquefaction and death. Injection of recombinant proteins into rice brown planthopper (Nilaparvata lugens) nymphs showed higher insecticidal activities, among which a trypsin (AcVP2) caused 100% mortality postinjection at 1.27 pmol mg-1 body weight.
    CONCLUSIONS: A natural toolkit for the discovery of insecticidal toxins from predatory insects has been revealed by the present study. © 2024 Society of Chemical Industry.
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  • 文章类型: Journal Article
    nuttalli天牛在基因上最接近于溶组织天牛,人类阿米巴病的病原体。纳塔利大肠杆菌在猕猴物种中发现,没有症状,但有潜在的毒性。使用内阿米巴物种的比较基因组学,我们鉴定了一个基因,该基因编码含有42个重复的八肽(PTORS)。在本研究中,我们分析了来自不同地理位置和宿主物种的纳塔利大肠杆菌菌株中的基因。四个菌株的基因组DNA序列分析表明,除了42个重复序列外,还有43、44和48个重复类型,并且在重复区具有显着的遗传多样性。尽管所有核苷酸取代都是同义的。相比之下,菌株之间的N端侧区和C端序列相同。针对重组PTORS制备的单克隆抗体与重复区反应,但不与N-末端侧区反应。多克隆抗体不与N末端区域反应,证明重复区具有较高的抗原性。使用合成肽的分析表明,八肽的两个重复序列充当表位。使用单克隆抗体的免疫荧光显微镜证明了PTORS的表面定位。这些结果表明,PTORS的重复区在宿主-寄生虫相互作用中起重要作用。
    Entamoeba nuttalli is genetically the closest to Entamoeba histolytica, the causative agent of human amebiasis. E. nuttalli is found in Macaca species, exhibiting no symptoms while potentially virulent. Using comparative genomics of Entamoeba species, we identified a gene encoding an E. nuttalli-specific protein containing 42 repeats of an octapeptide (PTORS). In the present study, we analyzed the genes in E. nuttalli strains derived from various geographic locations and host species. Sequence analysis of genomic DNA from four strains indicated 43, 44, and 48 repeat types in addition to 42 repeats and remarkable genetic diversity in the repeat region, although all nucleotide substitutions were synonymous. In contrast, the sequences of the N-terminal side region and C-terminus were identical among the strains. Monoclonal antibodies prepared against recombinant PTORS were reactive to the repeat regions but not to the N-terminal side regions. Polyclonal antibodies did not react with the N-terminal region, demonstrating that the repeat region had higher antigenicity. Analysis using synthetic peptides revealed that the two repeats of the octapeptide functioned as epitopes. Immunofluorescence microscopy using monoclonal antibodies demonstrated the surface localization of PTORS. These results suggest that the repeat region of PTORS plays an important role in host-parasite interactions.
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