Multilayer perceptron

多层感知器
  • 文章类型: Journal Article
    蓝藻有害藻华(cyanoHAB)的数量有所增加,导致了氰基HABs预测模型的广泛发展。尽管细菌与蓝细菌相互作用密切,并直接影响氰HABs的发生,与水质等环境数据相比,相关的建模研究很少利用微生物群落数据。在这项研究中,我们建立了一个机器学习模型,多层感知器(MLP),使用来自大川水库和Nakdong河的细菌群落和每周水质数据来预测微囊藻的动态,韩国。建模性能,由R2值表示,将细菌群落数据与环境因素相结合的模型提高到0.97,与仅使用环境因素的模型中的0.78相比。这强调了微生物群落在cyanoHABs预测中的重要性。通过对MLP模型的事后分析,我们发现氮源在微囊藻水华中起着比磷源更重要的作用,而细菌扩增子序列变体彼此之间的贡献没有显着差异。类似于MLP模型的结果,细菌数据在多元线性回归(MLR)中的可预测性也高于环境数据.在MLP和MLR模型中,微涛科与微囊藻的联系最强。这种建模方法可以更好地理解细菌和氰HAB之间的相互作用,利用环境细菌数据,促进开发更准确、更可靠的氰基HAB预测模型。
    The number of cyanobacterial harmful algal blooms (cyanoHABs) has increased, leading to the widespread development of prediction models for cyanoHABs. Although bacteria interact closely with cyanobacteria and directly affect cyanoHABs occurrence, related modeling studies have rarely utilized microbial community data compared to environmental data such as water quality. In this study, we built a machine learning model, the multilayer perceptron (MLP), for the prediction of Microcystis dynamics using both bacterial community and weekly water quality data from the Daechung Reservoir and Nakdong River, South Korea. The modeling performance, indicated by the R2 value, improved to 0.97 in the model combining bacterial community data with environmental factors, compared to 0.78 in the model using only environmental factors. This underscores the importance of microbial communities in cyanoHABs prediction. Through the post-hoc analysis of the MLP models, we revealed that nitrogen sources played a more critical role than phosphorus sources in Microcystis blooms, whereas the bacterial amplicon sequence variants did not have significant differences in their contribution to each other. Similar to the MLP model results, bacterial data also had higher predictability in multiple linear regression (MLR) than environmental data. In both the MLP and MLR models, Microscillaceae showed the strongest association with Microcystis. This modeling approach provides a better understanding of the interactions between bacteria and cyanoHABs, facilitating the development of more accurate and reliable models for cyanoHABs prediction using ambient bacterial data.
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  • 文章类型: Journal Article
    为了提高预测性能并减少拉曼光谱中的伪影,我们开发了一种极限梯度增强(XGBoost)预处理方法来预处理葡萄糖的拉曼光谱,甘油和乙醇的混合物。为保证XGBoost预处理方法的鲁棒性和可靠性,开发了X-LR模型(结合了XGBoost预处理和线性回归(LR)模型)和X-MLP模型(结合了XGBoost预处理和多层感知器(MLP)模型)。这两个模型用于定量分析葡萄糖的浓度,混合溶液的拉曼光谱中的甘油和乙醇。在X-LR模型和X-MLP模型中,首先利用超参数比例图缩小超参数的搜索范围。然后相关系数(R2),校准均方根(RMSEC),和预测均方根误差(RMSEP)用于评估模型的性能。实验结果表明,XGBoost预处理方法具有较高的精度和泛化能力,与其他预处理方法相比,LR和MLP模型的性能更好。
    To improve prediction performance and reduce artifacts in Raman spectra, we developed an eXtreme Gradient Boosting (XGBoost) preprocessing method to preprocess the Raman spectra of glucose, glycerol and ethanol mixtures. To ensure the robustness and reliability of the XGBoost preprocessing method, an X-LR model (which combined XGBoost preprocessing and a linear regression (LR) model) and a X-MLP model (which combined XGBoost preprocessing and a multilayer perceptron (MLP) model) were developed. These two models were used to quantitatively analyze the concentrations of glucose, glycerol and ethanol in the Raman spectra of mixed solutions. The proportion map of hyperparameters was firstly used to narrow down the search range of hyperparameters in the X-LR and the X-MLP models. Then the correlation coefficients (R2), root mean square of calibration (RMSEC), and root mean square error of prediction (RMSEP) were used to evaluate the models\' performance. Experimental results indicated that the XGBoost preprocessing method achieved higher accuracy and generalization capability, with better performance than those of other preprocessing methods for both LR and MLP models.
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  • 文章类型: Journal Article
    提出了一种使用卷积神经网络(CNN)作为构建块来检测全球导航卫星信号(GNSS)信号中多径效应的存在的技术。网络经过训练和验证,对于广泛的C/N0值,具有由与不同多普勒频率和代码延迟(时域数据集)相关联的相关器的2D网格的合成噪声输出构成的现实数据集。多径干扰信号的生成与所采用的多径模型所包含的各种场景一致。已经发现,利用二维离散傅里叶变换(频域数据集)预处理相关器网格的输出使得CNN能够相对于时域数据集提高准确度。根据CNN输出的类型,然后可以设计两种策略来求解导航方程:从方程中删除干扰信号(硬决策)或使用加权最小二乘算法处理伪距,其中使用神经网络的模拟输出计算加权矩阵的条目(软决策)。
    A technique is proposed to detect the presence of the multipath effect in Global Navigation Satellite Signal (GNSS) signals using a convolutional neural network (CNN) as the building block. The network is trained and validated, for a wide range of C/N0 values, with a realistic dataset constituted by the synthetic noisy outputs of a 2D grid of correlators associated with different Doppler frequencies and code delays (time-domain dataset). Multipath-disturbed signals are generated in agreement with the various scenarios encompassed by the adopted multipath model. It was found that pre-processing the outputs of the correlators grid with the two-dimensional Discrete Fourier Transform (frequency-domain dataset) enables the CNN to improve the accuracy relative to the time-domain dataset. Depending on the kind of CNN outputs, two strategies can then be devised to solve the equation of navigation: either remove the disturbed signal from the equation (hard decision) or process the pseudoranges with a weighted least-squares algorithm, where the entries of the weighting matrix are computed using the analog outputs of the neural network (soft decision).
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  • 文章类型: Journal Article
    这项研究使用人工神经网络(ANN)来检验空气污染物之间的复杂关系,气象因素,和呼吸系统疾病。该研究调查了呼吸系统疾病住院患者与PM10和SO2污染物水平之间的相关性,以及当地的气象条件,使用2017年至2019年的数据。这项研究的目的是阐明空气污染对一般人群福祉的影响,特别关注呼吸道疾病。使用称为多层感知器(MLP)的ANN。使用Levenberg-Marquardt(LM)反向传播算法训练网络。数据显示上呼吸道疾病住院人数大幅增加,共11,746宗案件。有明显的季节性波动,秋季支气管炎病例最多(N=181),鼻窦炎(N=83),和上呼吸道感染(N=194)。研究还发现了人口统计学差异,女性和18至65岁的人的入学率更高。ANN模型的性能,使用R2值测量,显示出高水平的预测准确性。具体来说,训练期间的R2值为0.91675,0.99182在测试过程中,和0.95287用于验证哮喘的预测。比较分析表明,ANN-MLP模型提供了最佳结果。结果强调了神经网络在代表空气质量之间复杂关系方面的有效性,气候条件,和呼吸健康。研究结果为制定重点医疗政策和治疗措施以减轻空气污染和气象因素的不利影响提供了重要见解。
    This study uses artificial neural networks (ANNs) to examine the intricate relationship between air pollutants, meteorological factors, and respiratory disorders. The study investigates the correlation between hospital admissions for respiratory diseases and the levels of PM10 and SO2 pollutants, as well as local meteorological conditions, using data from 2017 to 2019. The objective of this study is to clarify the impact of air pollution on the well-being of the general population, specifically focusing on respiratory ailments. An ANN called a multilayer perceptron (MLP) was used. The network was trained using the Levenberg-Marquardt (LM) backpropagation algorithm. The data revealed a substantial increase in hospital admissions for upper respiratory tract diseases, amounting to a total of 11,746 cases. There were clear seasonal fluctuations, with fall having the highest number of cases of bronchitis (N = 181), sinusitis (N = 83), and upper respiratory infections (N = 194). The study also found demographic differences, with females and people aged 18 to 65 years having greater admission rates. The performance of the ANN model, measured using R2 values, demonstrated a high level of predictive accuracy. Specifically, the R2 value was 0.91675 during training, 0.99182 during testing, and 0.95287 for validating the prediction of asthma. The comparative analysis revealed that the ANN-MLP model provided the most optimal result. The results emphasize the effectiveness of ANNs in representing the complex relationships between air quality, climatic conditions, and respiratory health. The results offer crucial insights for formulating focused healthcare policies and treatments to alleviate the detrimental impact of air pollution and meteorological factors.
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  • 文章类型: Journal Article
    (1)背景:本研究旨在调查运动和恢复期心率变异性(HRV)与大学生焦虑和抑郁水平之间的相关性。此外,该研究评估了基于多层感知器的HRV分析预测这些情绪状态的准确性.(2)方法:845名健康大学生,年龄在18至22岁之间,参与了这项研究。参与者完成了焦虑和抑郁自评量表(SAS和PHQ-9)。在运动期间和运动后5分钟内收集HRV数据。多层感知器神经网络模型,其中包括几个具有相同配置的分支,用于数据处理。(3)结果:通过5倍交叉验证方法,HRV预测焦虑水平的平均准确率为89.3%,83.6%为轻度焦虑,中度至重度焦虑为74.9%。对于抑郁水平,没有抑郁的平均准确率为90.1%,84.2%为轻度抑郁症,中度至重度抑郁症为82.1%。焦虑和抑郁评分的R平方预测值分别为0.62和0.41。(4)结论:研究表明,大学生运动和恢复过程中的HRV能有效预测焦虑和抑郁水平。然而,分数预测的准确性需要进一步提高。与运动相关的HRV可以作为评估心理健康的非侵入性生物标志物。
    (1) Background: This study aims to investigate the correlation between heart rate variability (HRV) during exercise and recovery periods and the levels of anxiety and depression among college students. Additionally, the study assesses the accuracy of a multilayer perceptron-based HRV analysis in predicting these emotional states. (2) Methods: A total of 845 healthy college students, aged between 18 and 22, participated in the study. Participants completed self-assessment scales for anxiety and depression (SAS and PHQ-9). HRV data were collected during exercise and for a 5-min period post-exercise. The multilayer perceptron neural network model, which included several branches with identical configurations, was employed for data processing. (3) Results: Through a 5-fold cross-validation approach, the average accuracy of HRV in predicting anxiety levels was 89.3% for no anxiety, 83.6% for mild anxiety, and 74.9% for moderate to severe anxiety. For depression levels, the average accuracy was 90.1% for no depression, 84.2% for mild depression, and 82.1% for moderate to severe depression. The predictive R-squared values for anxiety and depression scores were 0.62 and 0.41, respectively. (4) Conclusions: The study demonstrated that HRV during exercise and recovery in college students can effectively predict levels of anxiety and depression. However, the accuracy of score prediction requires further improvement. HRV related to exercise can serve as a non-invasive biomarker for assessing psychological health.
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  • 文章类型: Journal Article
    目的:开发并验证一种影像组学模型,用于在实施治疗前预测隐匿性局部晚期食管鳞状细胞癌(LA-ESCC)的计算机断层扫描(CT)影像特征。
    方法:该研究回顾性收集了来自两个医疗中心的574例食管鳞状细胞癌(ESCC)患者,分为三组进行培训,内部和外部验证。在描绘感兴趣的体积(VOI)之后,使用三种稳健方法提取影像组学特征并进行特征选择。随后,构建了10个机器学习模型,其中,利用最佳模型建立了影像组学签名。此外,我们开发了一个结合了临床和影像组学特征的预测性列线图.通过接收器工作特性曲线评估了这些模型的性能,校正曲线,决策曲线分析以及包括准确性在内的措施,灵敏度,和特异性。
    结果:总共选择了19个影像组学特征。多层感知器(MLP),被发现是最优的,在训练中达到0.919、0.864和0.882的AUC,内部和外部验证队列,分别。同样,MLP在区分cT1-2N0M0亚组中隐匿性LA-ESCC方面显示出良好的准确性,在两个验证队列中分别为0.803和0.789。通过将影像组学签名与临床签名相结合,在外部验证队列中,预测列线图显示出优异的预测性能,AUC为0.877,准确度为0.85.
    结论:影像组学和机器学习模型可以提高隐匿性LA-ESCC预测的准确性,为临床医生选择治疗方案提供有价值的帮助。
    OBJECTIVE: Development and validation of a radiomics model for predicting occult locally advanced esophageal squamous cell carcinoma (LA-ESCC) on computed tomography (CT) radiomic features before implementation of treatment.
    METHODS: The study retrospectively collected 574 patients with esophageal squamous cell carcinoma (ESCC) from two medical centers, which were divided into three cohorts for training, internal and external validation. After delineating volume of interest (VOI), radiomics features were extracted and subjected to feature selection using three robust methods. Subsequently, 10 machine learning models were constructed, among which the optimal model was utilized to establish a radiomics signature. Furthermore, a predictive nomogram incorporating both clinical and radiomics signatures was developed. The performance of these models was evaluated through receiver operating characteristic curves, calibration curves, decision curve analysis as well as measures including accuracy, sensitivity, and specificity.
    RESULTS: A total of 19 radiomics features were selected. The multilayer perceptron (MLP), which was found to be optimal, achieved an AUC of 0.919, 0.864 and 0.882 in the training, internal and external validation cohorts, respectively. Similarly, MLP showed good accuracy in distinguish occult LA-ESCC in subgroup of cT1-2N0M0 diagnosed by clinicians with 0.803 and 0.789 in two validation cohorts respectively. By incorporating the radiomics signature with clinical signature, a predictive nomogram demonstrated superior prediction performance with an AUC of 0.877 and accuracy of 0.85 in external validation cohort.
    CONCLUSIONS: The radiomics and machine learning model can offers improved accuracy in prediction of occult LA-ESCC, providing valuable assistance to clinicians when choosing treatment plans.
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  • 文章类型: Journal Article
    通过Fenton氧化对总石油烃(TPH)污染的土壤进行原位修复是一种有前途的方法。然而,在复杂的地质条件下确定Fenton反应中H2O2和Fe源的适当注入量对于原位TPH土壤修复仍然是一个艰巨的挑战。在这里,我们介绍了一种使用软计算模型的实用和新颖的方法,多层感知人工神经网络(MPLNN),用于预测TPH去除性能。在这项研究中,我们使用Fenton氧化进行了48组TPH去除实验,以确定各种不同地面条件下的TPH去除性能,并产生336个数据点。因此,在铁注入质量和土壤中自然存在的铁矿物中获得了负的皮尔逊相关系数,表明过量的Fe可以显著延缓Fenton反应中TPH的去除性能。此外,使用正切S形作为传递函数的缩放共轭梯度反向传播(SCG)进行6-6-1训练的MPLNN模型显示出很高的TPH去除预测精度,相关性确定为0.974,均方误差值为0.0259。优化的MPLNN模型通过Fenton氧化预测实际TPH污染土壤中的TPH去除性能的误差小于20%。因此,所提出的MPLNN可用于提高Fenton氧化对TPH原位土壤修复的去除性能。
    In-situ remediation of total petroleum hydrocarbon (TPH) contaminated soils via Fenton oxidation is a promising approach. However, determining the proper injection amount of H2O2 and Fe source over the Fenton reaction in the complex geological conditions for in-situ TPH soil remediation remains a daunting challenge. Herein, we introduced a practical and novel approach using soft computational models, a multilayer perception artificial neural network (MPLNN), for predicting the TPH removal performance. In this study, we conducted 48 sets of TPH removal experiments using Fenton oxidation to determine the TPH removal performance of a wide range of different ground conditions and generated 336 data points. As a result, a negative Pearson correlation coefficient was obtained in the Fe injection mass and the natural presence of Fe mineral in the soil, indicating that the excess of Fe could significantly retarded the TPH removal performance in the Fenton reaction. In addition, the MPLNN model with 6-6-1 training using Scaled conjugate gradient backpropagation (SCG) with tangent sigmoid as the transfer function demonstrated a high accuracy for TPH removal prediction with the correlation determination of 0.974 and mean square error value of 0.0259. The optimized MPLNN model achieved less than 20% error for predicting TPH removal performance in actual TPH-contaminated soil via Fenton oxidation. Hence, the proposed MPLNN can be useful in improving the Fenton oxidation of TPH removal performance in-situ soil remediation.
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  • 文章类型: Journal Article
    药物诱导的肝损伤(DILI)对制药行业和监管机构提出了重大挑战。尽管广泛的毒理学研究旨在减轻DILI风险,这些技术在预测人类DILI方面的有效性仍然有限。因此,研究人员探索了新的方法和程序,以提高正在开发的候选药物的DILI风险预测的准确性.在这项研究中,我们利用大型人类数据集来开发用于评估DILI风险的机器学习模型。使用10倍交叉验证方法和外部测试集严格评估了这些预测模型的性能。值得注意的是,随机森林(RF)和多层感知器(MLP)模型是预测DILI最有效的模型。在交叉验证期间,RF的平均预测精度为0.631,而MLP的最高马修斯相关系数(MCC)为0.245。要从外部验证模型,我们将其应用于一组因肝毒性而在临床开发中失败的候选药物.RF和MLP在该外部验证中均准确预测了毒性候选药物。我们的研究结果表明,计算机机器学习方法有望在开发过程中识别与候选药物相关的DILI负债。
    Drug-induced liver injury (DILI) poses a significant challenge for the pharmaceutical industry and regulatory bodies. Despite extensive toxicological research aimed at mitigating DILI risk, the effectiveness of these techniques in predicting DILI in humans remains limited. Consequently, researchers have explored novel approaches and procedures to enhance the accuracy of DILI risk prediction for drug candidates under development. In this study, we leveraged a large human dataset to develop machine learning models for assessing DILI risk. The performance of these prediction models was rigorously evaluated using a 10-fold cross-validation approach and an external test set. Notably, the random forest (RF) and multilayer perceptron (MLP) models emerged as the most effective in predicting DILI. During cross-validation, RF achieved an average prediction accuracy of 0.631, while MLP achieved the highest Matthews Correlation Coefficient (MCC) of 0.245. To validate the models externally, we applied them to a set of drug candidates that had failed in clinical development due to hepatotoxicity. Both RF and MLP accurately predicted the toxic drug candidates in this external validation. Our findings suggest that in silico machine learning approaches hold promise for identifying DILI liabilities associated with drug candidates during development.
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  • 文章类型: Journal Article
    分娩前预测产后出血(PPH)对于提高患者预后至关重要。能够及时转移和实施预防性治疗。我们试图利用机器学习(ML),使用基本的产前临床数据和实验室测量来预测非复杂单胎妊娠的产后血红蛋白(Hb)。两个学术护理中心关于病人分娩的本地数据库被纳入本研究。预先存在凝血功能障碍的患者,创伤性病例,和同种异体输血被排除在所有分析之外.使用弹性网络回归和随机森林算法的特征选择评估了分娩前变量与分娩后24小时血红蛋白水平的关联。采用了一套ML算法来预测分娩后的Hb水平。2051名孕妇中,1974年被列入最终分析。经过数据预处理和冗余变量去除后,通过特征选择来预测分娩后Hb的最高预测因子是奇偶校验(B:0.09[0.05-0.12]),胎龄,分娩前血红蛋白(B:0.83[0.80-0.85])和纤维蛋白原水平(B:0.01[0.01-0.01]),和产前血小板计数(B*1000:0.77[0.30-1.23])。在经过训练的算法中,人工神经网络提供了最准确的模型(均方根误差:0.62),它随后被部署为基于Web的计算器:https://predictivecalculators。shinyapps.io/ANN-HB.当前的研究表明,ML模型可以用作PPH间接测量的准确预测因子,并且可以很容易地纳入医疗保健系统。对基于异质群体的样本的进一步研究可能会进一步提高这些模型的泛化性。
    Predicting postpartum hemorrhage (PPH) before delivery is crucial for enhancing patient outcomes, enabling timely transfer and implementation of prophylactic therapies. We attempted to utilize machine learning (ML) using basic pre-labor clinical data and laboratory measurements to predict postpartum Hemoglobin (Hb) in non-complicated singleton pregnancies. The local databases of two academic care centers on patient delivery were incorporated into the current study. Patients with preexisting coagulopathy, traumatic cases, and allogenic blood transfusion were excluded from all analyses. The association of pre-delivery variables with 24-h post-delivery hemoglobin level was evaluated using feature selection with Elastic Net regression and Random Forest algorithms. A suite of ML algorithms was employed to predict post-delivery Hb levels. Out of 2051 pregnant women, 1974 were included in the final analysis. After data pre-processing and redundant variable removal, the top predictors selected via feature selection for predicting post-delivery Hb were parity (B: 0.09 [0.05-0.12]), gestational age, pre-delivery hemoglobin (B:0.83 [0.80-0.85]) and fibrinogen levels (B:0.01 [0.01-0.01]), and pre-labor platelet count (B*1000: 0.77 [0.30-1.23]). Among the trained algorithms, artificial neural network provided the most accurate model (Root mean squared error: 0.62), which was subsequently deployed as a web-based calculator: https://predictivecalculators.shinyapps.io/ANN-HB . The current study shows that ML models could be utilized as accurate predictors of indirect measures of PPH and can be readily incorporated into healthcare systems. Further studies with heterogenous population-based samples may further improve the generalizability of these models.
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  • 文章类型: Journal Article
    对于癌症治疗,现在的重点是将化疗药物靶向癌细胞而不损害其他正常细胞。基于生物相容性磁性载体的新材料将用于靶向癌症治疗,然而,应该理解它们的有效性。本文对包含变量x(m)的数据集进行了全面分析,y(m),和U(m/s),其中U表示血液通过含有铁磁流体的血管的速度。使用混合模型研究了外部磁场对流体流动的影响。这项研究的主要目的是构建精确可靠的速度预测模型,利用提供的输入变量。几个基本模型,包括K近邻(KNN),决策树(DT),和多层感知器(MLP),进行了培训和评估。此外,实现了一个名为AdaBoost的集成模型,以进一步提高预测性能。超参数优化技术,特别是BAT优化算法,被用来对模型进行微调。实验结果证明了该方法的有效性。AdaBoost算法和决策树模型的组合在R2方面产生了令人印象深刻的0.99783分,表明了强大的预测性能。此外,该模型表现出较低的错误率,如5.2893×10-3的均方根误差(RMSE)所示。同样,AdaBoost-KNN模型使用R2指标表现出0.98524的高分,RMSE为1.3291×10-2。此外,AdaBoost-MLP模型获得令人满意的R2得分为0.99603,RMSE为7.1369×10-3。
    For cancer therapy, the focus is now on targeting the chemotherapy drugs to cancer cells without damaging other normal cells. The new materials based on bio-compatible magnetic carriers would be useful for targeted cancer therapy, however understanding their effectiveness should be done. This paper presents a comprehensive analysis of a dataset containing variables x(m), y(m), and U(m/s), where U represents velocity of blood through vessel containing ferrofluid. The effect of external magnetic field on the fluid flow is investigated using a hybrid modeling. The primary aim of this research endeavor was to construct precise and dependable predictive models for velocity, utilizing the provided input variables. Several base models, including K-nearest neighbors (KNN), decision tree (DT), and multilayer perceptron (MLP), were trained and evaluated. Additionally, an ensemble model called AdaBoost was implemented to further enhance the predictive performance. The hyper-parameter optimization technique, specifically the BAT optimization algorithm, was employed to fine-tune the models. The results obtained from the experiments demonstrated the effectiveness of the proposed approach. The combination of the AdaBoost algorithm and the decision tree model yielded a highly impressive score of 0.99783 in terms of R2, indicating a strong predictive performance. Additionally, the model exhibited a low error rate, as evidenced by the root mean square error (RMSE) of 5.2893 × 10-3. Similarly, the AdaBoost-KNN model exhibited a high score of 0.98524 using R2 metric, with an RMSE of 1.3291 × 10-2. Furthermore, the AdaBoost-MLP model obtained a satisfactory R2 score of 0.99603, accompanied by an RMSE of 7.1369 × 10-3.
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