Gene mutation

基因突变
  • 文章类型: Case Reports
    背景:这项研究提出了在青春期发生的成人发病糖尿病的罕见病例的临床和基因突变特征,具有过氧化物酶体增殖物激活受体γ(PPARG)基因的独特突变。数据访问声明:支持本出版物的研究数据可从www上的NN存储库中获得。NNN.org/download/.
    方法:所采用的方法需要从先证者及其各自的家庭成员中仔细收集全面的临床数据。此外,进行高通量测序以分析患者的PPARG基因,她的兄弟姐妹,和他们的后代。这项调查的结果表明,患者最初在怀孕期间表现出升高的血糖水平,伴有胰岛素抵抗和高甘油三酯血症。此外,这些菌株对糖尿病肾病的易感性增加,且没有任何明显的聚集模式.基因检测过程的结果表明,鸟嘌呤(G)在PPARG外显子2编码区的284位发生杂合突变,它取代了碱基腺嘌呤(A)(exon2c.284A>Gp。Tyr95Cys)。这种错义突变导致酪氨酸在翻译蛋白的第95位被半胱氨酸取代。值得注意的是,她的两个兄弟姐妹在同一位点都有一个核苷酸杂合变异,两人都被诊断出患有糖尿病。
    结论:PPARG基因突变,尤其是p.Tyr95Cys突变,可能代表了一种新发现的青少年成熟型糖尿病亚型。该亚型的特征在于胰岛素抵抗和脂质代谢紊乱。
    BACKGROUND: This study presents the clinical and genetic mutation characteristics of an unusual case of adult-onset diabetes mellitus occurring in adolescence, featuring a unique mutation in the peroxisome proliferator-activated receptor gamma (PPARG) gene. Data Access Statement: Research data supporting this publication are available from the NN repository at www.NNN.org/download/.
    METHODS: The methodology employed entailed meticulous collection of comprehensive clinical data from the probands and their respective family members. Additionally, high-throughput sequencing was conducted to analyze the PPARG genes of the patient, her siblings, and their offspring. The results of this investigation revealed that the patient initially exhibited elevated blood glucose levels during pregnancy, accompanied by insulin resistance and hypertriglyceridemia. Furthermore, these strains displayed increased susceptibility to diabetic kidney disease without any discernible aggregation patterns. The results from the gene detection process demonstrated a heterozygous mutation of guanine (G) at position 284 in the coding region of exon 2 of PPARG, which replaced the base adenine (A) (exon2c.284A>Gp.Tyr95Cys). This missense mutation resulted in the substitution of tyrosine with cysteine at the 95th position of the translated protein. Notably, both of her siblings harbored a nucleotide heterozygous variation at the same site, and both were diagnosed with diabetes.
    CONCLUSIONS: The PPARG gene mutation, particularly the p.Tyr95Cys mutation, may represent a newly identified subtype of maturity-onset diabetes of the young. This subtype is characterized by insulin resistance and lipid metabolism disorders.
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  • 文章类型: Journal Article
    背景:RAS,BRAF,和错配修复(MMR)/微卫星不稳定性(MSI)是结直肠癌(CRC)临床实践指南推荐的关键生物标志物。然而,中国患者的特征和影响因素尚未得到全面描述。
    目的:分析KRAS的临床病理特征,NRAS,BRAF,和PIK3CA突变和CRC中的DNAMMR状态。
    方法:我们在中日友好医院招募了2271例中国CRC患者。MMR蛋白使用免疫组织化学分析进行测试,使用定量聚合酶链反应确定KRAS/NRAS/BRAF/PIK3CA突变。使用MSI检测试剂盒确定微卫星状态。采用SPSS软件和logistic回归进行统计分析。
    结果:KRAS,NRAS,BRAF,检测到PIK3CA突变占44.6%,3.4%,3.7%,3.9%的CRC患者,分别。KRAS突变更可能发生在中高分化患者中。BRAF突变更可能发生在右侧CRC患者中,分化差,或者没有神经周侵犯。在所有患者中的7.9%和粘液性腺癌患者中的16.8%中检测到缺陷MMR(dMMR)。KRAS,NRAS,BRAF,和PIK3CA突变检测29.6%,1.1%,8.1%,22.3%的dMMR患者,分别。dMMR更可能发生在有CRC家族史的患者中,年龄<50岁,右侧CRC,低分化组织学,无神经周侵犯,原位癌,阶段I,或II期肿瘤。
    结论:这项研究分析了KRAS的分子谱,NRAS,BRAF,PIK3CA,和CRC中的MMR/MSI,确定关键影响因素,对CRC临床管理的影响。
    BACKGROUND: RAS, BRAF, and mismatch repair (MMR)/microsatellite instability (MSI) are crucial biomarkers recommended by clinical practice guidelines for colorectal cancer (CRC). However, their characteristics and influencing factors in Chinese patients have not been thoroughly described.
    OBJECTIVE: To analyze the clinicopathological features of KRAS, NRAS, BRAF, and PIK3CA mutations and the DNA MMR status in CRC.
    METHODS: We enrolled 2271 Chinese CRC patients at the China-Japan Friendship Hospital. MMR proteins were tested using immunohistochemical analysis, and the KRAS/NRAS/BRAF/PIK3CA mutations were determined using quantitative polymerase chain reaction. Microsatellite status was determined using an MSI detection kit. Statistical analyses were conducted using SPSS software and logistic regression.
    RESULTS: The KRAS, NRAS, BRAF, and PIK3CA mutations were detected in 44.6%, 3.4%, 3.7%, and 3.9% of CRC patients, respectively. KRAS mutations were more likely to occur in patients with moderate-to-high differentiation. BRAF mutations were more likely to occur in patients with right-sided CRC, poorly differentiated, or no perineural invasion. Deficient MMR (dMMR) was detected in 7.9% of all patients and 16.8% of those with mucinous adenocarcinomas. KRAS, NRAS, BRAF, and PIK3CA mutations were detected in 29.6%, 1.1%, 8.1%, and 22.3% of patients with dMMR, respectively. The dMMR was more likely to occur in patients with a family history of CRC, aged < 50 years, right-sided CRC, poorly differentiated histology, no perineural invasion, and with carcinoma in situ, stage I, or stage II tumors.
    CONCLUSIONS: This study analyzed the molecular profiles of KRAS, NRAS, BRAF, PIK3CA, and MMR/MSI in CRC, identifying key influencing factors, with implications for clinical management of CRC.
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  • 文章类型: Case Reports
    脊髓性肌萎缩症(SMA)伴进行性肌阵挛性癫痫(PME)影响神经系统。症状出现在儿童早期,包括肌肉无力,行走困难,癫痫发作,和认知能力下降。尽管引入了各种疗法来恢复酸性神经酰胺酶功能或减少神经酰胺积累和基因治疗来纠正基因突变,与这种疾病相关的潜在分子机制仍然未知。本文报道了ASAH1基因中一个新的变异体c.118G>C。患者出现进行性肌无力和肌阵挛性惊厥等临床表现。临床特征和电生理检查显示运动神经元疾病和全身性癫痫放电。在SMA的初始诊断与随后的肌阵挛性癫痫发作表现之间观察到明显的时间间隔。先证者通过全外显子组测序(WES)进行遗传评估,然后进行变体确认和生物信息学分析。根据本文的研究结果和前人的研究,需要进一步的诊断测试和管理,以确定患者病情的严重程度和进展。
    Spinal muscular atrophy (SMA) with progressive myoclonic epilepsy (PME) affects the nervous system. Symptoms appear in early childhood and include muscle weakness, difficulty walking, seizures, and cognitive decline. Despite introducing various therapies to restore acid ceramidase function or reduce ceramide accumulation and gene therapy to correct genetic mutations, there are still unknown underlying molecular mechanisms related to this disorder. This article reports a novel variant c.118G>C in the ASAH1 gene. The patient presented with clinical manifestations such as progressive muscle weakness and myoclonic convulsions. Clinical features and electrophysiological investigations revealed a motor neuron disease and generalized epileptic discharge. A significant temporal interval was observed between the initial diagnosis of SMA and the subsequent manifestation of myoclonic seizures. The proband was genetically assessed through whole exome sequencing (WES) followed by variant confirmation and bioinformatics analysis. According to this article\'s findings and previous research, further diagnostic testing and management are needed to determine the severity and progression of the patient\'s condition.
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  • 文章类型: Case Reports
    特发性先天性眼球震颤(ICN)是一种遗传性疾病,其特征是无法控制的双眼共轭振荡。X连锁特发性先天性眼球震颤是ICN的最常见类型之一。阐明ICN涉及的遗传机制将增强我们对其分子病因的理解。
    我们报告了一个女孩,双眼振荡无法控制,头部姿势异常,然后在她的家族成员中的FERM域包含7(FRMD7)基因的突变丰富区域内提出了一个新的杂合错义变体(c.686G>T)。女孩接受了闭塞治疗和外科手术,平衡了她的双眼视力并纠正了异常的头部姿势。
    这是有关突变(c.686G>T)导致Arg(R)在位置229处被Leu(L)取代的第一份报告(p。ICN患者的FRMD7蛋白的R229L)。
    UNASSIGNED: Idiopathic congenital nystagmus (ICN) is an inherited disorder characterized by uncontrollable binocular conjugating oscillation. X-linked idiopathic congenital nystagmus is one of the most prevalent types of ICN. Elucidation of the genetic mechanisms involved in ICN will enhance our understanding of its molecular etiology.
    UNASSIGNED: We report a girl with uncontrollable binocular oscillation and anomalous head posture, then presented a novel heterozygous missense variant (c.686G>T) within the mutation-rich region of the FERM domain containing 7 (FRMD7) gene in her family member. The girl received occlusion therapy and surgical operation which balanced her binocular vision and corrected the anomalous head posture.
    UNASSIGNED: This is the first report on a mutation (c.686G>T) caused the substitution of Arg (R) with Leu (L) at position 229 (p.R229L) of the FRMD7 protein in a patient with ICN.
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  • 文章类型: Journal Article
    卵母细胞成熟停滞(OMA)是IVF/ICSI周期中观察到的常见表型,其特征是产生导致不育的未成熟卵母细胞。以前的研究表明,遗传因素在OMA中起重要作用,但是一组患者的遗传机制仍有待阐明。在最近一期的《辅助生殖与遗传学杂志》上,胡等人。和Wan等人。在OMA患者中鉴定出新型PATL2或ZFP36L2变体,分别。通过进行体外实验,他们证明了变体对蛋白质功能的破坏性影响。这些发现扩展了PATL2和ZFP36L2的突变谱,为OMA患者的遗传咨询提供了精确的参考。
    Oocyte maturation arrest (OMA) is a common phenotype observed in IVF/ICSI cycles, characterized by the production of immature oocytes which lead to infertility. Previous studies have demonstrated that genetic factors play an important role in OMA, but the genetic mechanisms underlying a group of patients remain to be elucidated. In the recent issue of Journal of Assisted Reproduction and Genetics, Hu et al. and Wan et al. identified novel PATL2 or ZFP36L2 variants in OMA patients, respectively. By conducting in vitro experiments, they demonstrated the destructive effect of the variants on protein function. These findings expand the mutational spectrum of PATL2 and ZFP36L2, and provide precise reference for genetic counseling of OMA patients.
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  • 文章类型: Case Reports
    婴儿全身性玻璃位症(ISH)是一种非常罕见的常染色体隐性遗传疾病,其特征在于透明材料的全身性积聚,导致广泛的组织破坏和功能损害。这种使人衰弱的疾病的迹象,可能涉及器官,皮肤异常,和关节挛缩,经常出现在婴儿期。关于ISH的现有研究很少,强调需要全方位的管理方法来解决广泛的症状并提高受影响婴儿的整体生活质量。ISH的跨学科方法强调了理疗作为关键因素的必要性,重点是解决与疾病相关的运动和发育问题。通过专门为其需求设计的治疗练习,可以改善ISH新生儿的机动性和功能独立性。这里,我们介绍了一例6个月大的男性儿童,他去了三级护理中心,抱怨自出生以来四肢活动很少,无法抓住脖子。在检查中,研究发现,远端关节上有低垂的耳朵,有流行的皮疹和挛缩。肌电图(EMG)和神经传导速度(NCV),有异常发现提示肌病。皮肤活检,已确认该儿童患有ISH。因此,病人被转介给物理治疗师。经过六周的物理治疗,研究发现,早期和一致的理疗干预与关节僵硬相关的疼痛和不适的减少有关,改善受影响的婴儿的一般舒适度。此外,物理治疗干预在支持适应性方法以绕过身体限制方面具有至关重要的作用,使ISH婴儿更容易达到发育里程碑,否则可能很困难。尽管关于物理治疗对ISH婴儿的影响的研究很少,新的数据表明,积极主动的,量身定制的物理治疗方案可以大大增强受影响儿童的功能能力,提高他们的整体生活质量,避免进一步的问题。将物理治疗纳入诊断为ISH的婴儿的综合护理中至关重要。这凸显了及时诊断的意义,跨学科合作,以及持续的研究旨在改善和优化这种罕见和严重的遗传疾病的理疗疗法。
    Infantile systemic hyalinosis (ISH) is a very rare autosomal recessive disorder, which is characterized by a systemic build-up of hyaline material that causes extensive tissue destruction and functional impairment. The signs of this debilitating illness, which can involve organs, skin anomalies, and joint contractures, frequently appear in infancy. The paucity of available research on ISH emphasizes the need for all-encompassing management approaches to address the wide range of symptoms and enhance the overall quality of life for impacted babies. The interdisciplinary approach to ISH highlights the need for physiotherapy as a crucial element, with an emphasis on addressing the motor and developmental problems linked to the illness. Improving mobility and functional independence in newborns with ISH is facilitated by therapeutic exercises designed specifically for their needs. Here, we present a case of a six-month-old male child who visited a tertiary care center with complaints of minimal movements of all four limbs since birth with the inability to hold the neck. On examination, it was found that there were low-set ears with popular rashes and contractures over distal joints. Electromyography (EMG) and nerve conduction velocity (NCV) were done, which had abnormal findings suggestive of myopathy. On skin biopsy, it was confirmed that the child was suffering from ISH. Thus, the patient was referred to a physiotherapist. After six weeks of physiotherapy sessions, it was found that early and consistent physiotherapy interventions have been linked to a decrease in joint stiffness-related pain and discomfort, improving the affected infants\' general comfort. Furthermore, physiotherapy interventions have a crucial role in supporting adaptive methods to get around physical restrictions, making it easier for infants with ISH to reach developmental milestones that could otherwise be difficult. Although there is little research on the effects of physical therapy on infants with ISH, new data indicate that a proactive, tailored physical therapy program can greatly enhance the functional ability of impacted children, improve their overall quality of life, and avert further problems. It is crucial to incorporate physiotherapy into the comprehensive care of infants diagnosed with ISH. This highlights the significance of timely diagnosis, interdisciplinary cooperation, and continuous research aimed at improving and optimizing physiotherapeutic therapies for this uncommon and crippling genetic illness.
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  • 文章类型: Case Reports
    脑静脉窦血栓形成(CVST)和高脂血症是L-天冬酰胺酶(L-Asp)治疗B细胞急性淋巴细胞白血病(B-ALL)的严重并发症。在这里,我们报道了一名9岁的B-ALL男孩,他在诱导治疗期间经历了异常的高甘油三酯血症和CVST,表现为癫痫发作和意识障碍两次.幸运的是,他在抗凝和降脂治疗中幸存下来。未检测到血栓形成相关基因突变,但在脂蛋白脂肪酶(LPL)基因中发现了杂合突变。他的神经症状通过短期抗凝治疗和长期降脂治疗得到控制。该病例说明了CVST的表现和潜在的发病机制,并强调了筛查基线血脂谱和血脂异常及血栓形成相关基因突变的必要性。
    Cerebral venous sinus thrombosis (CVST) and hyperlipidemia are severe complications of L-Asparaginase (L-Asp) during the treatment of B-cell acute lymphoblastic leukemia (B-ALL). Herein, we reported a 9-year-old B-ALL boy who underwent abnormal hypertriglyceridemia and CVST presenting as seizures and disturbance of consciousness twice during the induction therapy. Fortunately, he survived treatment with anticoagulant and lipid-lowering therapy. No thrombophilia-related gene mutation was detected, but a heterozygous mutation in lipoprotein lipase (LPL) gene was identified. His neurological symptoms were managed with short-term anticoagulant therapy and long-term lipid-lowering therapy. This case illustrated the manifestation and potential pathogenesis of CVST and highlighted the essentiality of screening baseline lipid profile and dyslipidemia- and thrombophilia-related gene mutation.
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  • 文章类型: Journal Article
    驱动基因是靶向治疗功效的重要预测因子。检测肺腺癌(LUAD)患者的驱动基因突变可以帮助筛选靶向药物并提高患者的生存效益。本研究旨在探讨LUAD中驱动基因的突变特征及其与临床病理特征的相关性。
    在2019年7月至2022年9月期间,共从邵逸夫爵士医院选择了440名LUAD患者。使用下一代测序技术分析术后组织标本的基因突变,聚焦,包括表皮生长因子受体EGFR,ALK,ROS1,RET,KRAS,MET,BRAF,HER2、PIK3CA和NRAS。同时,收集并整理临床病理资料进行多维相关分析.
    440名LUAD患者,48例患者未检测到驱动基因突变.驱动基因突变的患者比例高达89.09%。前三个驱动基因突变是EGFR,KRAS,和MET。共检测到69种类型的EGFR突变,并分布在蛋白酪氨酸激酶催化域(56,81.16%),富弗林蛋白酶样半胱氨酸区(9,13.04%),受体结合域(3,4.35%),和EGFR跨膜结构域(1,1.45%)。343例LUAD患者发生单基因位点突变,但是突变基因类型涵盖了所有测试基因。我们的研究结果表明,EGFR突变更常见于非吸烟和女性患者(P<0.01)。KRAS突变在男性患者和吸烟者中更为普遍(P<0.01)。ROS1突变的肿瘤直径较大(P<0.01),RET突变在吸烟者中更为普遍(P<0.05)。
    LUAD患者表现出不同的基因突变,这可能同时发生。多种突变的综合分析对于疾病的准确诊断和有效治疗至关重要。使用NGS可以大大扩展我们对基因突变的理解,并促进对多个基因突变的综合分析,为有针对性的治疗方法提供关键证据。
    UNASSIGNED: Driver genes are essential predictors of targeted therapeutic efficacy. Detecting driver gene mutations in lung adenocarcinoma (LUAD) patients can help to screen for targeted drugs and improve patient survival benefits. This study aims to investigate the mutation characterization of driver genes and their correlation with clinicopathological features in LUAD.
    UNASSIGNED: A total of 440 LUAD patients were selected from Sir Run Run Shaw Hospital between July 2019 and September 2022. Postoperative tissue specimens were analyzed for gene mutations using next-generation sequencing technology, focusing, including epidermal growth factor receptor EGFR, ALK, ROS1, RET, KRAS, MET, BRAF, HER2, PIK3CA and NRAS. At the same time, clinicopathological data were collected and organized for multidimensional correlation analysis.
    UNASSIGNED: Of 440 LUAD patients, driver gene mutations were not detected in 48 patients. The proportion of patients with driver gene mutations was as high as 89.09%. The top three driver genetic mutations were EGFR, KRAS, and MET. Sixty-nine types of EGFR mutations were detected and distributed in the protein tyrosine kinase catalytic domain (56, 81.16%), Furin-like cysteine-rich region (9, 13.04%), receptor binding domain (3, 4.35%), and EGFR transmembrane domain (1, 1.45%). Single gene locus mutation occurred in 343 LUAD patients, but the mutation gene types covered all tested genes. Our findings showed that EGFR mutations were more commonly observed in non-smoking and female patients (P<0.01), KRAS mutations were more prevalent in male patients and smokers (P<0.01), ROS1 mutations had larger tumor diameters (P<0.01) and RET mutations were more prevalent in smokers (P<0.05).
    UNASSIGNED: LUAD patients exhibit diverse genetic mutations, which may co-occur simultaneously. Integrated analysis of multiple mutations is essential for accurate diagnosis and effective treatment of the disease. The use of NGS can significantly expand our understanding of gene mutations and facilitate integrated analysis of multiple gene mutations, providing critical evidence for targeted treatment methods.
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  • 文章类型: Journal Article
    X-linked myotubular myopathy (XLMTM) is a rare congenital myopathy. In February 2021, a male neonate was admitted to the West China Second University Hospital, Sichuan University, with clinical manifestations of hypotonia, accompanied by distinctive facial features, and requiring continuous ventilatory support. He was born prematurely at 36+2 weeks gestation and developed respiratory distress postnatally, followed by difficulty in weaning from mechanical ventilation. Additional clinical features included hypotonia of the limbs, swallowing dysfunction, and specific facial characteristics (elongated limbs, narrow face, high-arched palate, wrist drop, empty scrotum, elongated fingers/toes). Genetic testing confirmed the diagnosis of XLMTM. Whole-exome sequencing analysis of the family revealed no mutations in the father, paternal grandfather, or paternal grandmother, while the mother had a heterozygous mutation. The pathogenic mutation was identified as MTM1 gene (OMIM: 300415), chromosome position chrX-150649714, with a nucleotide change of c.868-2A>C. The patient exhibited typical facial features. Genetic testing is crucial for accurate diagnosis of XLMTM in infants presenting with abnormal muscle tone and distinctive facial features.
    X-连锁肌小管肌病(X-linked myotubular myopathy,XLMTM)是一种罕见的先天性肌病。四川大学华西第二医院于2021年2月收治1例临床表现为肌张力低下、伴有特殊面容、需持续呼吸机辅助通气的男性新生儿,36+2周早产,出生后出现呼吸困难及治疗后撤机困难,伴有四肢肌张力低下、吞咽功能障碍及特殊外貌特征(四肢细长、面部狭长、高腭弓、双手垂腕、阴囊空虚、细长指/趾等),经基因检测确诊为XLMTM。其全外显子家系测序结果提示父亲、外公、外婆均无变异,母亲存在杂合变异,致病突变为MTM1(OMIM:300415),染色体位置为chrX-150649714,核苷酸变化为c.868-2A>C。该患儿具有典型的外貌特征,且经基因检测发现为新发的突变基因。对存在肌张力异常及特殊面容的患儿,早期进行基因检测对准确诊断XLMTM有重要意义。.
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