COVID‐19

COVID - 19
  • 文章类型: Journal Article
    微管亲和调节激酶2(MARK2)是一种Ser/Thr蛋白激酶,可调节细胞极性和免疫反应。这里,我们报告Orf9b,SARS-CoV-2基因组中编码的辅助蛋白之一,通过与自抑制性KAI结构域的相互作用增加MARK2活性。我们发现Orf9b的共表达增强了HEK293细胞中MARK2的激酶活性。Orf9b不结合缺乏KA1结构域的突变形式的MARK2或增强其活性。Orf9b在T595降低MARK2的抑制性磷酸化,而突变实验表明该位点对于Orf9b介导的MARK2活性的增强是不必要的。我们的结果表明,Orf9b通过结合自身抑制KA1结构域增强MARK2活性,与激酶结构域紧密相互作用。
    Microtubule affinity-regulating kinase 2 (MARK2) is a Ser/Thr protein kinase that regulates cell polarity and immune responses. Here, we report that Orf9b, one of the accessory proteins encoded in the SARS-CoV-2 genome, increases MARK2 activity via interaction with the autoinhibitory KAI domain. We found that co-expression of Orf9b enhances the kinase activity of MARK2 in HEK293 cells. Orf9b does not bind to or enhance the activity of the mutant form of MARK2 lacking the KA1 domain. Orf9b lowers inhibitory phosphorylation of MARK2 at T595 while mutation experiments indicate that this site is dispensable for Orf9b-mediated enhancement of MARK2 activity. Our results suggest that Orf9b enhances MARK2 activity by binding the autoinhibitory KA1 domain, which closely interacts with the kinase domain.
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  • 文章类型: Journal Article
    背景:鉴于了解COVID-19阳性供体发生率和接受度的重要性,我们描述了COVID-19发病率相对于COVID-19阳性供体接受度的时间和地理变化。
    方法:从UNOS数据库中获得了2020年至2023年之间的死亡供体和肝移植和肾移植受者的数据。采用层次聚类分析评估COVID-19阳性供体发生率的趋势。使用Kaplan-Meier曲线评估移植后移植物和患者存活率。
    结果:从38.429名已故捐献者中,1517例COVID-19阳性。更少的肾脏(72.4%vs.76.5%,p<0.001)和肝脏(56.4%vs.62.0%,p<0.001)来自COVID-19阳性供体和COVID-19阴性供体。以COVID-19供体发病率稳步上升为特征的地区移植接受率最高(92.33%),其次是中度(84.62%)和快速增加(80.00%)的COVID-19发病率区域(p=0.016)。移植后移植物和患者存活率在受者中相当,与捐赠者COVID-19的状态无关。
    结论:区域的COVID-19阳性供体比率升高与肝和肾移植的接受度降低有关。在接受者中注意到类似的移植物和患者存活率,与捐赠者COVID-19的状态无关。这些发现强调了在应对动态大流行时需要适应性实践和统一的医学共识。
    BACKGROUND: Given the importance of understanding COVID-19-positive donor incidence and acceptance, we characterize chronological and geographic variations in COVID-19 incidence relative to COVID-19-positive donor acceptance.
    METHODS: Data on deceased donors and recipients of liver and kidney transplants were obtained from the UNOS database between 2020 and 2023. Hierarchical cluster analysis was used to assess trends in COVID-19-positive donor incidence. Posttransplant graft and patient survival were assessed using Kaplan-Meier curves.
    RESULTS: From among 38 429 deceased donors, 1517 were COVID-19 positive. Fewer kidneys (72.4% vs. 76.5%, p < 0.001) and livers (56.4% vs. 62.0%, p < 0.001) were used from COVID-19-positive donors versus COVID-19-negative donors. Areas characterized by steadily increased COVID-19 donor incidence exhibit the highest transplantation acceptance rates (92.33%), followed by intermediate (84.62%) and rapidly increased (80.00%) COVID-19 incidence areas (p = 0.016). Posttransplant graft and patient survival was comparable among recipients, irrespective of donor COVID-19 status.
    CONCLUSIONS: Regions experiencing heightened rates of COVID-19-positive donors are associated with decreased acceptance of liver and kidney transplantation. Similar graft and patient survival is noted among recipients, irrespective of donor COVID-19 status. These findings emphasize the need for adaptive practices and unified medical consensus in navigating a dynamic pandemic.
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  • 文章类型: Journal Article
    背景:非小细胞肺癌(NSCLC)患者易患2019年冠状病毒病(COVID-19),但目前的治疗方法有限。淫羊藿苷II(IS),一种来自植物淫羊藿苷的类黄酮化合物,显示抗癌,抗炎和免疫调节作用。本研究旨在评估IS对患有COVID-19(NSCLC/COVID-19)的NSCLC患者的可能影响和潜在机制。
    方法:NSCLC/COVID-19靶标被定义为NSCLC(从癌症基因组图谱数据库收集)和COVID-19靶标(从基因卡的疾病数据库收集,OMIM,和NCBI)。使用生存R包分析NSCLC/COVID-19靶点与NSCLC患者生存率的相关性。使用单变量和多变量Cox比例风险回归模型进行预后分析。此外,IS治疗NSCLC/COVID-19的靶点被定义为IS的重叠靶点(从TMSCP药物数据库预测,HERB,SwissTarget预测)和非小细胞肺癌/COVID-19目标。基因本体论和京都百科全书基因和基因组富集分析这些治疗目标的目的是了解生物过程,细胞成分,分子功能和信号通路。通过蛋白质-蛋白质相互作用网络分析枢纽靶标,并通过分子对接表征与IS的结合能力。
    结果:在NSCLC/COVID-19治疗中,IS的中心靶点包括F2,SELE,MMP1、MMP2、AGTR1和AGTR2的分子对接结果表明,上述靶蛋白与IS具有良好的结合度。网络药理学表明,IS可能会影响白细胞的迁移,炎症反应和活性氧代谢过程,以及调节NSCLC/COVID-19中白细胞介素-17、肿瘤坏死因子和缺氧诱导因子-1信号通路。
    结论:IS可能会提高目前临床抗炎和抗癌治疗的疗效,使合并COVID-19的NSCLC患者受益。
    BACKGROUND: Patients with non-small cell lung cancer (NSCLC) are susceptible to coronavirus disease-2019 (COVID-19), but current treatments are limited. Icariside II (IS), a flavonoid compound derived from the plant epimedin, showed anti-cancer,anti-inflammation and immunoregulation effects. The present study aimed to evaluate the possible effect and underlying mechanisms of IS on NSCLC patients with COVID-19 (NSCLC/COVID-19).
    METHODS: NSCLC/COVID-19 targets were defined as the common targets of NSCLC (collected from The Cancer Genome Atlas database) and COVID-19 targets (collected from disease database of Genecards, OMIM, and NCBI). The correlations of NSCLC/COVID-19 targets and survival rates in patients with NSCLC were analyzed using the survival R package. Prognostic analyses were performed using univariate and multivariate Cox proportional hazards regression models. Furthermore, the targets in IS treatment of NSCLC/COVID-19 were defined as the overlapping targets of IS (predicted from drug database of TMSCP, HERBs, SwissTarget Prediction) and NSCLC/COVID-19 targets. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analysis of these treatment targets were performed aiming to understand the biological process, cellular component, molecular function and signaling pathway. The hub targets were analyzed by a protein-protein interaction network and the binding capacity with IS was characterized by molecular docking.
    RESULTS: The hub targets for IS in the treatment of NSCLC/COVID-19 includes F2, SELE, MMP1, MMP2, AGTR1 and AGTR2, and the molecular docking results showed that the above target proteins had a good binding degree to IS. Network pharmacology showed that IS might affect the leucocytes migration, inflammation response and active oxygen species metabolic process, as well as regulate the interleukin-17, tumor necrosus factor and hypoxia-inducible factor-1 signaling pathway in NSCLC/COVID-19.
    CONCLUSIONS: IS may enhance the therapeutic efficacy of current clinical anti-inflammatory and anti-cancer therapy to benefit patients with NSCLC combined with COVID-19.
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  • 文章类型: Case Reports
    我们报告了一例晚期睾丸癌,即使在诱导化疗期间感染COVID-19后,也通过早期适当恢复化疗治愈。
    患者是一名健康的36岁男性。诊断为IIIB期非精原细胞瘤(pT2N2M1a)。在第一个化疗周期的第14天,患者被诊断为轻度COVID-19。第二个化疗周期延迟1天开始(在COVID-19诊断后第10天)。患者在最小程度推迟化疗的情况下获得缓解。
    只有少数病例报告描述了COVID-19患者恢复抗癌化疗。在决定COVID-19感染后何时恢复化疗时,必须考虑癌症类型等因素,programming,和COVID-19的严重程度,应根据个体患者的需求量身定制。
    UNASSIGNED: We report a case of advanced testicular cancer cured by early and appropriate resumption of chemotherapy even after COVID-19 infection during induction chemotherapy.
    UNASSIGNED: The patient was a healthy 36-year-old male. The diagnosis was a stage IIIB nonseminoma (pT2N2M1a). On day 14 of the first chemotherapy cycle, the patient was diagnosed with mild COVID-19. The second chemotherapy cycle was initiated with a 1-day delay (on day 10 after the COVID-19 diagnosis). The patient achieved remission with minimal postponement of chemotherapy.
    UNASSIGNED: Only a few case reports have described the resumption of anticancer chemotherapy in patients with COVID-19. In deciding when to resume chemotherapy after COVID-19 infection, it is essential to consider factors such as cancer type, progression, and severity of COVID-19 and should be tailored to individual patient needs.
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  • 文章类型: Journal Article
    我们的目标是通过确定继发性菌血症的时机以及验证和更新COVID-19患者菌血症的临床预测模型来帮助适当使用抗菌药物。
    我们对2020年1月1日和2021年9月30日在日本城市教学医院接受血液培养测试的所有确诊为COVID-19的住院患者进行了回顾性队列研究。主要结局指标是COVID-19患者的继发性菌血症。
    在507例COVID-19住院患者中,有169例接受了血培养检查。其中11人患有继发性菌血症。大多数继发性菌血症发生在症状发作后第9天或更晚。在发病后第9天或更晚收集的阳性血培养样本与发病后不到9天收集的样本相比,比值比为22.4(95%CI2.76-181.2,p<0.001)。在发病第9天或之后,改良的Shapiro规则结合血培养收集的受试者工作特征曲线下面积为0.919(95%CI,0.843-0.995),根据决策曲线分析,净收益较高。
    症状发作和入院时间可能是临床决定对COVID-19住院患者进行血培养的有价值的指标。
    UNASSIGNED: We aimed to aid the appropriate use of antimicrobial agents by determining the timing of secondary bacteremia and validating and updating clinical prediction models for bacteremia in patients with COVID-19.
    UNASSIGNED: We performed a retrospective cohort study on all hospitalized patients diagnosed with COVID-19 who underwent blood culture tests from January 1, 2020, and September 30, 2021, at an urban teaching hospital in Japan. The primary outcome measure was secondary bacteremia in patients with COVID-19.
    UNASSIGNED: Of the 507 patients hospitalized with COVID-19, 169 underwent blood culture tests. Eleven of them had secondary bacteremia. The majority of secondary bacteremia occurred on or later than the 9th day after symptom onset. Positive blood culture samples collected on day 9 or later after disease onset had an odds ratio of 22.4 (95% CI 2.76-181.2, p < 0.001) compared with those collected less than 9 days after onset. The area under the receiver operating characteristic curve of the modified Shapiro rule combined with blood culture collection on or after the 9th day from onset was 0.919 (95% CI, 0.843-0.995), and the net benefit was high according to the decision curve analysis.
    UNASSIGNED: The timings of symptom onset and hospital admission may be valuable indicators for making a clinical decision to perform blood cultures in patients hospitalized with COVID-19.
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  • 文章类型: Journal Article
    在高危患者中使用主动免疫和被动免疫来预防COVID-19的严重病程,但预防性中和抗体对mRNA疫苗免疫反应的影响仍然是个谜。在这里,我们显示CD4T和B细胞对Spikevax加强免疫的反应被治疗性抗体Casirivimab和Imdevimab抑制。B细胞和T细胞应答在对照中被显著诱导,但在抗体处理的患者中未被诱导。数据表明,体液免疫,即高水平的抗体,负面影响反应性免疫,导致增强时细胞反应减弱。这表明疫苗接种工作的时间分离;优选在预防性治疗性抗体治疗之前应用主动疫苗接种。
    Active and passive immunization is used in high-risk patients to prevent severe courses of COVID-19, but the impact of prophylactic neutralizing antibodies on the immune reaction to the mRNA vaccines has remained enigmatic. Here we show that CD4 T and B cell responses to Spikevax booster immunization are suppressed by the therapeutic antibodies Casirivimab and Imdevimab. B cell and T cell responses were significantly induced in controls but not in antibody-treated patients. The data indicates that humoral immunity, i. e. high levels of antibodies, negatively impacts reactive immunity, resulting in blunted cellular responses upon boosting. This argues for temporal separation of vaccination efforts; with active vaccination preferably applied before prophylactic therapeutic antibody treatment.
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  • 文章类型: Journal Article
    背景:自COVID-19爆发以来,中国采取了多种预防和控制措施,有效降低了杭州市儿科人群中多种传染病的发病率。我们旨在调查在此期间儿科患者中人类副流感病毒3(HPIV-3)的遗传和流行病学特征。
    方法:从2020年11月至2021年3月的门诊和住院患者中收集了1442例咽拭子样本,诊断为急性呼吸道感染(ARTI)。通过定量实时聚合酶链反应(qRT-PCR)检测HPIV-3。对HPIV-3阳性样品的L基因进行扩增和测序。
    结果:在1442名患有ARTI的儿童中,HPIV-3阳性率为7.07%(102/1442)。6个月至1岁年龄组的阳性检出率最高。在36例HPIV-3阳性样本中观察到共感染(35.29%,36/102),腺病毒(ADV)是最常见的共感染病毒(63.89%,23/36)。对48份HPIV-3阳性样品的L基因进行测序。核苷酸序列分析具有较高的一致性(92.10%-99.40%),所有菌株都属于C3a。
    结论:在研究期间,儿童HPIV-3阳性检出率高,在HPIV-3混合ADV感染中,合并感染的比例最高。系统发育分析显示HPIV-3的L基因的核苷酸序列高度一致,该地区的主要流行菌株是C3a亚型。
    BACKGROUND: Since the outbreak of COVID-19, China has undertaken a variety of preventative and control measures, effectively reducing the incidence of numerous infectious diseases among the pediatric population in Hangzhou. We aim to investigate the genetic and epidemiological characteristics of Human parainfluenza virus-3 (HPIV-3) in pediatric patients during this period.
    METHODS: A total of 1442 pharyngeal swab samples were collected from outpatients and inpatients with a diagnosis of acute respiratory tract infections (ARTIs) from November 2020 to March 2021. HPIV-3 was detected by quantitative real time polymerase chain reaction (qRT-PCR). The L gene of HPIV-3 positive samples was amplified and sequenced.
    RESULTS: Among 1442 children with ARTI, the positive rate of HPIV-3 was 7.07% (102/1442). The positive detection rate was the highest in the 6-month to 1-year age group. Coinfection was observed in 36 HPIV-3-positive samples (35.29%, 36/102), and adenovirus (ADV) was the most common coinfecting virus (63.89%, 23/36). The L gene of 48 HPIV-3 positive samples was sequenced. The nucleotide sequence analysis showed high consistency (92.10%-99.40%), and all strains belonged to C3a.
    CONCLUSIONS: During study periods, the positive detection rate of HPIV-3 among children is high, and the highest proportion of coinfection was observed in HPIV-3 mixed ADV infection. Phylogenetic analysis revealed that the nucleotide sequence of the L gene of HPIV-3 was highly consistent, and the main epidemic strain in this area was the C3a subtype.
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  • 文章类型: Letter
    暂无摘要。
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  • 文章类型: Journal Article
    目的:分析COVID-19疫苗临床试验方案的一般和主要结局相关特征。
    方法:一项荟萃研究。在ClinicalTrials.gov平台上搜索了COVID-19疫苗的临床试验方案。我们考虑了截至2021年10月26日注册的所有比较试验方案。
    结果:分析了二百八十二项试验。中位预期试验持续时间为445天(四分位距[IQR]=225),目标样本量中位数为420名参与者(IQR=1638).对42.55%的试验进行回顾性登记(在开始日期之后)。在282项试验中,有84.75%的人计划了随机程序,而34.75%的人计划了完全盲法程序。大多数试验被标记为活跃或仍在招募,完成14项试验(5%).在我们的搜索日期标记为完成的14项试验中,没有一项结果可用。198项试验报告了行业资助(70.2%)。大多数研究宣布了不止一个主要结果,通常是安全性或免疫原性结果,59项研究(20.9%)至少有一项主要疗效结局.在大多数情况下,主要疗效结果的描述是有限的,称为非指定的“疗效”结果(18.6%)或描述为“COVID-19病例”(32.2%)。
    结论:COVID-19疫苗临床试验的主要结果描述不充分,登记册提供的信息不足。许多试验的注册都是回顾性的,这可能会导致偏见和研究浪费。结果被一般性地描述,没有提供在实践中复制的透明信息,进一步的试验或荟萃分析。
    OBJECTIVE: To analyse the general and primary outcome-related characteristics of clinical trials protocols on COVID-19 vaccines.
    METHODS: A meta-research study. A search for clinical trial protocols on COVID-19 vaccines was conducted on the ClinicalTrials.gov platform. We considered all protocols of comparative trials registered up to October 26, 2021.
    RESULTS: Two hundred and eighty-two trials were analysed. The median expected trial duration was 445 days (interquartile range [IQR] = 225), and the median target sample size was 420 participants (IQR = 1638). A retrospective registry (after the start date) was observed for 42.55% of the trials. Randomization procedures were planned by 84.75% and full-blinding procedures by 34.75% of the 282 trials. Most trials were labelled as active or still recruiting, and 14 trials (5%) were completed. None of the 14 trials labelled as completed on our search date had results available. Industry funding was reported by 198 trials (70.2%). Most studies declared more than one primary outcome, usually a safety or immunogenicity outcome, and 59 studies (20.9%) had at least one primary efficacy outcome. The description of the primary efficacy outcomes was limited in most cases, referred to as a non-specified \'efficacy\' outcome (18.6%) or described as \'COVID-19 cases\' (32.2%).
    CONCLUSIONS: the primary outcomes of clinical trials on COVID-19 vaccines are poorly described, and the registers provide insufficient information about them. The registry was retrospectively fulfilled for many trials, which may lead to bias and research waste. Outcomes were generically described and did not provide transparent information for replication in practice, further trials or meta-analyses.
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  • 文章类型: Journal Article
    本次范围审查的目的是综合与COVID-19感染相关的心理健康问题的心理干预措施的已发表研究和正在进行的临床试验。该研究方案是根据系统评价和荟萃分析(PRISMA)扩展范围评价的首选报告项目制定的。我们使用八个科学数据库和临床试验注册中心,对2020年1月至2022年10月之间发表或注册的研究进行了系统搜索。确定了40项完整的已发表研究和53项正在进行的临床试验。我们发现,大多数研究是随机对照试验(74%),而其余的研究设计的方法学质量较低。大多数研究调查了急性COVID-19患者的干预措施(74%),其他研究探讨了COVID后状况(PCC)或康复患者。认知和行为疗法是主要的干预方法(31%),其次是多学科计划(21%)和正念(17%)。最常评估的结果是焦虑(33%),抑郁症(26%),生活质量(13%),失眠(10%)。没有关于年轻人的研究,老年人,或边缘化社区被发现。这些发现总结了对感染COVID-19的个体进行一系列心理干预的新兴研究。然而,该领域尚处于起步阶段,需要进一步研究以开发有针对性护理的证据基础。目前研究中发现的差距也凸显了对青少年进行更多研究的必要性,老年人,和边缘化社区的成员,PCC患者。重要的是要确定干预措施和交付策略,不仅有效且负担得起,而且还允许高可扩展性和可访问性。
    The aim of this scoping review was to synthesize published studies and ongoing clinical trials of psychological interventions for mental health problems associated with COVID-19 infection. The study protocol was developed according to the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) Extension for Scoping Reviews. We conducted systematic searches for studies published or registered between January 2020 and October 2022 using eight scientific databases and clinical trial registries, which identified 40 complete published studies and 53 ongoing clinical trials. We found that most studies were randomized controlled trials (74%) while the remaining used study designs of lower methodological quality. Most studies investigated interventions for acute COVID-19 patients (74%) and others explored post-COVID conditions (PCC) or recovered patients. Cognitive and behavioral therapies were the main intervention approaches (31%), followed by multidisciplinary programs (21%) and mindfulness (17%). The most frequently evaluated outcomes were anxiety (33%), depression (26%), quality of life (13%), and insomnia (10%). No studies on youths, older people, or marginalized communities were found. These findings summarize the burgeoning research on a range of psychological interventions for individuals infected with COVID-19. However, the field is in its infancy and further research to develop an evidence base for targeted care is necessary. The gaps identified in the current study also highlight the need for more research on youths, older people, and members of marginalized communities, and PCC patients. It is important to ascertain interventions and delivery strategies that are not only effective and affordable but also allow high scalability and accessibility.
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