{Reference Type}: Journal Article
{Title}: Texture-based speciation of otitis media-related bacterial biofilms from optical coherence tomography images using supervised classification.
{Author}: Zaki FR;Monroy GL;Shi J;Sudhir K;Boppart SA;
{Journal}: J Biophotonics
{Volume}: 0
{Issue}: 0
{Year}: 2024 Aug 5
{Factor}: 3.39
{DOI}: 10.1002/jbio.202400075
{Abstract}: Otitis media (OM), a highly prevalent inflammatory middle-ear disease in children worldwide, is commonly caused by an infection, and can lead to antibiotic-resistant bacterial biofilms in recurrent/chronic OM cases. A biofilm related to OM typically contains one or multiple bacterial species. OCT has been used clinically to visualize the presence of bacterial biofilms in the middle ear. This study used OCT to compare microstructural image texture features from bacterial biofilms. The proposed method applied supervised machine-learning-based frameworks (SVM, random forest, and XGBoost) to classify multiple species bacterial biofilms from in vitro cultures and clinically-obtained in vivo images from human subjects. Our findings show that optimized SVM-RBF and XGBoost classifiers achieved more than 95% of AUC, detecting each biofilm class. These results demonstrate the potential for differentiating OM-causing bacterial biofilms through texture analysis of OCT images and a machine-learning framework, offering valuable insights for real-time in vivo characterization of ear infections.