%0 Journal Article %T Intergenic risk variant rs56258221 skews the fate of naive CD4+ T cells via miR4464-BACH2 interplay in primary sclerosing cholangitis. %A Poch T %A Bahn J %A Casar C %A Krause J %A Evangelakos I %A Gilladi H %A Kunzmann LK %A Laschtowitz A %A Iuso N %A Schäfer AM %A Liebig LA %A Steinmann S %A Sebode M %A Folseraas T %A Engesæter LK %A Karlsen TH %A Franke A %A Hubner N %A Schlein C %A Galun E %A Huber S %A Lohse AW %A Gagliani N %A Schwinge D %A Schramm C %J Cell Rep Med %V 5 %N 7 %D 2024 Jul 16 %M 38901430 %F 16.988 %R 10.1016/j.xcrm.2024.101620 %X Primary sclerosing cholangitis (PSC) is an immune-mediated liver disease of unknown pathogenesis, with a high risk to develop cirrhosis and malignancies. Functional dysregulation of T cells and association with genetic polymorphisms in T cell-related genes were previously reported for PSC. Here, we genotyped a representative PSC cohort for several disease-associated risk loci and identified rs56258221 (BACH2/MIR4464) to correlate with not only the peripheral blood T cell immunophenotype but also the functional capacities of naive CD4+ T (CD4+ TN) cells in people with PSC. Mechanistically, rs56258221 leads to an increased expression of miR4464, in turn causing attenuated translation of BACH2, a major gatekeeper of T cell quiescence. Thereby, the fate of CD4+ TN is skewed toward polarization into pro-inflammatory subsets. Clinically, people with PSC carrying rs56258221 show signs of accelerated disease progression. The data presented here highlight the importance of assigning functional outcomes to disease-associated genetic polymorphisms as potential drivers of diseases.