%0 Journal Article %T Structure and repair of replication-coupled DNA breaks. %A Pavani R %A Tripathi V %A Vrtis KB %A Zong D %A Chari R %A Callen E %A Pankajam AV %A Zhen G %A Matos-Rodrigues G %A Yang J %A Wu S %A Reginato G %A Wu W %A Cejka P %A Walter JC %A Nussenzweig A %J Science %V 385 %N 6710 %D 2024 Aug 16 %M 38900911 %F 63.714 %R 10.1126/science.ado3867 %X Using CRISPR-Cas9 nicking enzymes, we examined the interaction between the replication machinery and single-strand breaks, one of the most common forms of endogenous DNA damage. We show that replication fork collapse at leading-strand nicks generates resected single-ended double-strand breaks (seDSBs) that are repaired by homologous recombination (HR). If these seDSBs are not promptly repaired, arrival of adjacent forks creates double-ended DSBs (deDSBs), which could drive genomic scarring in HR-deficient cancers. deDSBs can also be generated directly when the replication fork bypasses lagging-strand nicks. Unlike deDSBs produced independently of replication, end resection at nick-induced seDSBs and deDSBs is BRCA1-independent. Nevertheless, BRCA1 antagonizes 53BP1 suppression of RAD51 filament formation. These results highlight distinctive mechanisms that maintain replication fork stability.