%0 Journal Article
%T PMart Web Application: Marketplace for Interactive Analysis of Panomics Data.
%A Stratton KG
%A Claborne DM
%A Degnan DJ
%A Richardson RE
%A White AM
%A McCue LA
%A Webb-Robertson BM
%A Bramer LM
%J J Proteome Res
%V 23
%N 8
%D 2024 Aug 2
%M 38085827
%F 5.37
%R 10.1021/acs.jproteome.3c00512
%X PMart is a web-based tool for reproducible quality control, exploratory data analysis, statistical analysis, and interactive visualization of 'omics data, based on the functionality of the pmartR R package. The newly improved user interface supports more 'omics data types, additional statistical capabilities, and enhanced options for creating downloadable graphics. PMart supports the analysis of label-free and isobaric-labeled (e.g., TMT, iTRAQ) proteomics, nuclear magnetic resonance (NMR) and mass-spectrometry (MS)-based metabolomics, MS-based lipidomics, and ribonucleic acid sequencing (RNA-seq) transcriptomics data. At the end of a PMart session, a report is available that summarizes the processing steps performed and includes the pmartR R package functions used to execute the data processing. In addition, built-in safeguards in the backend code prevent users from utilizing methods that are inappropriate based on omics data type. PMart is a user-friendly interface for conducting exploratory data analysis and statistical comparisons of omics data without programming.