%0 Journal Article %T A robust yeast biocontainment system with two-layered regulation switch dependent on unnatural amino acid. %A Chang T %A Ding W %A Yan S %A Wang Y %A Zhang H %A Zhang Y %A Ping Z %A Zhang H %A Huang Y %A Zhang J %A Wang D %A Zhang W %A Xu X %A Shen Y %A Fu X %J Nat Commun %V 14 %N 1 %D 2023 10 14 %M 37838746 %F 17.694 %R 10.1038/s41467-023-42358-4 %X Synthetic auxotrophy in which cell viability depends on the presence of an unnatural amino acid (unAA) provides a powerful strategy to restrict unwanted propagation of genetically modified organisms (GMOs) in open environments and potentially prevent industrial espionage. Here, we describe a generic approach for robust biocontainment of budding yeast dependent on unAA. By understanding escape mechanisms, we specifically optimize our strategies by introducing designed "immunity" to the generation of amber-suppressor tRNAs and developing the transcriptional- and translational-based biocontainment switch. We further develop a fitness-oriented screening method to easily obtain multiplex safeguard strains that exhibit robust growth and undetectable escape frequency (<~10-9) on solid media for 14 days. Finally, we show that employing our multiplex safeguard system could restrict the proliferation of strains of interest in a real fermentation scenario, highlighting the great potential of our yeast biocontainment strategy to protect the industrial proprietary strains.