%0 Journal Article %T High prevalence of SARS-CoV-2 detection and prolonged viral shedding in stools: A systematic review and cohort study. %A Díaz LA %A García-Salum T %A Fuentes-López E %A Reyes D %A Ortiz J %A Chahuan J %A Levican J %A Almonacid LI %A Valenzuela GH %A Serrano E %A Budnik S %A Gandara V %A Gallardo A %A Seydewitz MF %A Ferrés M %A Cofré C %A Álvarez M %A Pavez C %A Candia R %A Monrroy H %A Espino A %A Rada G %A Ortiz L %A Valderrama S %A Salinas E %A Toro A %A Ortega M %A Pizarro M %A Medina RA %A Riquelme A %J Gastroenterol Hepatol %V 45 %N 8 %D Oct 2022 %M 35077722 %F 5.867 %R 10.1016/j.gastrohep.2021.12.009 %X OBJECTIVE: To: 1. Describe the frequency of viral RNA detection in stools in a cohort of patients infected with SARS-CoV-2, and 2. Perform a systematic review to assess the clearance time in stools of SARS-CoV-2.
METHODS: We conducted a prospective cohort study in two centers between March and May 2020. We included SARS-CoV-2 infected patients of any age and severity. We collected seriated nasopharyngeal swabs and stool samples to detect SARS-CoV-2. After, we performed a systematic review of the prevalence and clearance of SARS-CoV-2 in stools (PROSPERO-ID: CRD42020192490). We estimated prevalence using a random-effects model. We assessed clearance time by using Kaplan-Meier curves.
RESULTS: We included 32 patients; mean age was 43.7±17.7 years, 43.8% were female, and 40.6% reported gastrointestinal symptoms. Twenty-five percent (8/32) of patients had detectable viral RNA in stools. The median clearance time in stools of the cohort was 11[10-15] days. Systematic review included 30 studies (1392 patients) with stool samples. Six studies were performed in children and 55% were male. The pooled prevalence of viral detection in stools was 34.6% (twenty-four studies, 1393 patients; 95%CI:25.4-45.1); heterogeneity was high (I2:91.2%, Q:208.6; p≤0.001). A meta-regression demonstrates an association between female-gender and lower presence in stools (p=0.004). The median clearance time in stools was 22 days (nineteen studies, 140 patients; 95%CI:19-25). After 34 days, 19.9% (95%CI:11.3-29.7) of patients have a persistent detection in stools.
CONCLUSIONS: Detection of SARS-CoV-2 in stools is a frequent finding. The clearance of SARS-CoV-2 in stools is prolonged and it takes longer than nasopharyngeal secretions.