METHODS: We compare genome-wide methylation profiles of macroscopically intact (low-grade) and degraded (high-grade) osteoarthritis cartilage samples matched from osteoarthritis patients undergoing knee replacement surgery. We perform an epigenome-wide association study for cartilage degeneration across 170 patients and separately in 96 women and 74 men.
RESULTS: We reveal widespread epigenetic differences with enrichments of nervous system and apoptosis-related processes. We further identify substantial similarities between sexes, but also sex-specific markers and pathways.
CONCLUSIONS: Together, we provide the largest genome-wide methylation profiles of primary cartilage to date with enhanced and sex-specific insights into epigenetic processes underlying osteoarthritis progression.
方法:我们比较了与接受膝关节置换手术的骨关节炎患者相匹配的宏观完整(低度)和降解(高度)骨关节炎软骨样本的全基因组甲基化谱。我们对170名患者以及96名女性和74名男性进行了软骨退化的表观基因组关联研究(EWAS)。
结果:我们揭示了广泛的表观遗传差异,包括神经系统和凋亡相关过程的富集。我们进一步确定了两性之间的实质性相似性,还有性别特异性标记和途径。
结论:一起,我们提供了迄今为止最大的原发性软骨全基因组甲基化谱,并增强了对骨关节炎进展的表观遗传过程的性别特异性认识.