关键词: ANLN ASPM WGCNA bladder urothelial carcinoma weighted gene co-expression network analysis

来  源:   DOI:10.3389/fgene.2023.1107625   PDF(Pubmed)

Abstract:
Introduction: Bladder cancer (BLCA) is one of the most common malignancies in the urinary system with a poor prognosis and high treatment costs. Identifying potential prognostic biomarkers is significant for exploring new therapeutic and predictive targets of BLCA. Methods: In this study, we screened differentially expressed genes using the GSE37815 dataset. We then performed a weighted gene co-expression network analysis (WGCNA) to identify the genes correlated with the histologic grade and T stage of BLCA using the GSE32548 dataset. Subsequently, Kaplan Meier survival analysis and Cox regression were used to further identify prognosis-related hub genes using the datasets GSE13507 and TCGA-BLCA. Moreover, we detected the expression of the hub genes in 35 paired samples, including BLCA and paracancerous tissue, from the Shantou Central Hospital by qRT-polymerase chain reaction. Results: This study showed that Anillin (ANLN) and Abnormal spindle-like microcephaly-associated gene (ASPM) were prognostic biomarkers for BLCA. High expression of ANLN and ASPM was associated with poor overall survival.The qRT-PCR results revealed that ANLN and ASPM genes were upregulated in BLCA, and there was a correlation between the expression of ANLN and ASPM in cancer tissues and paracancerous tissue. Additionally, the increasing multiples in the ANLN gene was obvious in high-grade BLCA. Discussion: In summary, this preliminary exploration indicated a correlation between ANLN and ASPM expression. These two genes, serving as the risk factors for BLCA progression, might be promising targets to improve the occurrence and progression of BLCA.
摘要:
简介:膀胱癌(BLCA)是泌尿系统最常见的恶性肿瘤之一,预后差,治疗费用高。识别潜在的预后生物标志物对于探索BLCA的新治疗和预测靶标具有重要意义。方法:在本研究中,我们使用GSE37815数据集筛选了差异表达基因.然后,我们使用GSE32548数据集进行加权基因共表达网络分析(WGCNA)以鉴定与BLCA的组织学分级和T期相关的基因。随后,使用数据集GSE13507和TCGA-BLCA,使用Kaplan-Meier生存分析和Cox回归进一步鉴定预后相关中枢基因。此外,我们在35个配对样本中检测到hub基因的表达,包括BLCA和癌旁组织,来自汕头市中心医院的qRT-聚合酶链反应。结果:这项研究表明,Anillin(ANLN)和异常纺锤形小头畸形相关基因(ASPM)是BLCA的预后生物标志物。ANLN和ASPM的高表达与低总生存率相关。qRT-PCR结果显示ANLN和ASPM基因在BLCA中表达上调,ANLN和ASPM在癌组织和癌旁组织中的表达存在相关性。此外,在高级别BLCA中,ANLN基因的倍数增加明显。讨论:总之,这一初步探索表明ANLN和ASPM表达之间存在相关性。这两个基因,作为BLCA进展的危险因素,可能是改善BLCA发生和进展的有希望的目标。
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