关键词: Mullidae mitochondrial genome phylogenetic analysis

来  源:   DOI:10.1080/23802359.2022.2075287   PDF(Pubmed)

Abstract:
Parupeneus indicus, a species in the family Mullidae, inhabits the coastal and inner lagoon reefs of the Indian and Pacific oceans. The mitochondrial genome of P. indicus is 16,566 base pairs in length and contains 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and a D-loop control region. The overall base composition is 26.58% A, 24.83% T, 30.39% C, and 18.19% G, indicating an AT-rich profile (51.41%). Phylogenetic analysis based on the 13 PCGs revealed a close evolutionary relationship between P. indicus and P. barberinus. The data obtained in this study represent a valuable mitogenomic resource for population studies in the family Mullidae and will contribute to gaining a better understanding of the conservation genetics and environmental DNA of these fish.
摘要:
帕鲁伯斯indicus,Mullidae家族中的一个物种,栖息在印度洋和太平洋的沿海和内泻湖珊瑚礁。印度假单胞菌的线粒体基因组长度为16,566个碱基对,包含13个蛋白质编码基因(PCGs),22个转移RNA(tRNA)基因,两个核糖体RNA(rRNA)基因,和D环控制区。整体基础成分为26.58%A,24.83%T,30.39%C,和18.19%G,表明AT丰富的概况(51.41%)。基于13个PCGs的系统发育分析揭示了印度假单胞菌和巴伯菌之间存在密切的进化关系。在这项研究中获得的数据代表了Mullidae家族种群研究的宝贵有丝分裂基因组学资源,并将有助于更好地了解这些鱼类的保护遗传学和环境DNA。
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